Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC073072.2-201ENST00000447425 348 ntBASIC5□□□□□ -1.61
SDCBPO00560 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5□□□□□ -1.61
SDCBPO00560 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5□□□□□ -1.61
SDCBPO00560 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5□□□□□ -1.61
SDCBPO00560 RN7SL836P-201ENST00000476140 296 ntBASIC5□□□□□ -1.61
SDCBPO00560 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 AC111000.6-201ENST00000514471 709 ntBASIC5□□□□□ -1.61
SDCBPO00560 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5□□□□□ -1.61
SDCBPO00560 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5□□□□□ -1.61
SDCBPO00560 AC090424.1-201ENST00000535243 736 ntBASIC5□□□□□ -1.61
SDCBPO00560 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5□□□□□ -1.61
SDCBPO00560 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 AC092681.3-201ENST00000609463 678 ntBASIC5□□□□□ -1.61
SDCBPO00560 AC015819.1-201ENST00000613588 663 ntBASIC5□□□□□ -1.61
SDCBPO00560 AC099654.15-201ENST00000639802 509 ntBASIC5□□□□□ -1.61
SDCBPO00560 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 AC018717.1-201ENST00000457712 1505 ntBASIC5□□□□□ -1.61
SDCBPO00560 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5□□□□□ -1.61
SDCBPO00560 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 AC022325.1-201ENST00000502748 2199 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.99□□□□□ -1.61
SDCBPO00560 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SDCBPO00560 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 RPL35AP31-201ENST00000418340 337 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 OR5W1P-201ENST00000423705 938 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 RPL5P2-201ENST00000429598 854 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC007383.1-201ENST00000445875 636 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AL590004.3-202ENST00000445883 451 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC016027.4-201ENST00000450866 277 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AC002553.3-201ENST00000453002 341 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 FRG2FP-204ENST00000453982 852 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 AL603882.1-201ENST00000463059 681 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AC083795.1-201ENST00000491760 320 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 RN7SL612P-201ENST00000497704 295 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 GUSBP9-201ENST00000510138 584 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AC097486.1-201ENST00000515331 210 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 RNA5SP441-201ENST00000516809 88 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AP001000.1-201ENST00000526843 742 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 BTG1P1-201ENST00000540396 508 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.99□□□□□ -1.61
SDCBPO00560 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.99□□□□□ -1.61
SDCBPO00560 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.99□□□□□ -1.61
SDCBPO00560 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.99□□□□□ -1.61
SDCBPO00560 AL135999.3-201ENST00000610501 812 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 AL355974.3-201ENST00000617383 467 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 MIR6813-201ENST00000621638 56 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SDCBPO00560 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 AL137058.3-201ENST00000624531 3099 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.99□□□□□ -1.61
SDCBPO00560 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
SDCBPO00560 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
SDCBPO00560 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDCBPO00560 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
SDCBPO00560 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.98□□□□□ -1.61
SDCBPO00560 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SDCBPO00560 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SDCBPO00560 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SDCBPO00560 AC016745.2-201ENST00000608834 3443 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 AC092865.3-201ENST00000425390 1026 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC130360.1-201ENST00000425489 1117 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC099782.1-201ENST00000425889 474 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms