Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 OR8X1P-201ENST00000534542 869 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 MIR4433B-201ENST00000581329 102 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC096947.1-201ENST00000603233 470 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AL359704.2-201ENST00000604335 521 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AL451064.1-201ENST00000607718 471 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC015982.1-201ENST00000608113 465 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 FAM27E2-201ENST00000619668 403 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AP003400.2-201ENST00000624036 666 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 HSPD1P9-201ENST00000420325 1636 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 NAMPTP1-201ENST00000440465 2514 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC093225.1-201ENST00000506867 1408 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC007406.5-201ENST00000570140 3170 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 CR383656.5-201ENST00000547616 1340 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RNU1-24P-201ENST00000364285 165 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AL023284.3-201ENST00000407767 334 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RPSAP65-201ENST00000429660 595 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 MTND2P2-201ENST00000434633 945 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RPL12P31-201ENST00000478433 450 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC090568.1-201ENST00000509499 856 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RN7SKP98-201ENST00000517070 156 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC015818.6-201ENST00000584274 634 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 GLYATL1P2-202ENST00000588046 902 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC005332.4-201ENST00000592752 579 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AL352984.2-201ENST00000611153 546 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AP001002.1-201ENST00000625148 1513 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 AL591135.1-201ENST00000401578 5914 ntBASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CTDP1Q9Y5B0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 RNA5SP350-201ENST00000363298 111 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 GCNT6-201ENST00000379591 934 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC008753.1-201ENST00000423096 284 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 MAPRE1P3-201ENST00000435438 796 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 OR4D12P-201ENST00000509361 911 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 IGKV1D-22-201ENST00000518953 324 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 COX6B1P4-201ENST00000519826 484 ntBASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.34□□□□□ -1.23
CTDP1Q9Y5B0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms