Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC120057.5-201ENST00000623840 154 ntBASIC6.05□□□□□ -1.44
LRFN1Q9P244 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 AC010325.3-201ENST00000641084 394 ntBASIC6.05□□□□□ -1.44
LRFN1Q9P244 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.05□□□□□ -1.44
LRFN1Q9P244 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
LRFN1Q9P244 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LRFN1Q9P244 MT-RNR2-201ENST00000387347 1559 ntBASIC6.05□□□□□ -1.44
LRFN1Q9P244 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LRFN1Q9P244 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRFN1Q9P244 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 GAPDHP15-201ENST00000398586 975 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 MIR1275-201ENST00000408770 80 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL359092.1-201ENST00000417156 265 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC013410.2-201ENST00000422627 201 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL512637.2-201ENST00000431287 1256 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 RNFT1P2-201ENST00000443064 757 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC023512.1-201ENST00000444513 499 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 MOB1AP2-201ENST00000446060 614 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC016724.1-201ENST00000453215 421 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC020779.1-201ENST00000478757 796 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC113367.2-201ENST00000505749 160 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 HMGN1P17-201ENST00000513734 295 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC092375.1-201ENST00000550410 637 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL589765.6-201ENST00000601909 549 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 ABI1P1-201ENST00000603375 1120 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC013731.1-201ENST00000604340 883 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC073137.1-201ENST00000605636 634 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC034236.3-201ENST00000605999 461 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC005277.2-201ENST00000617898 390 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL591926.1-201ENST00000620542 217 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL122023.1-201ENST00000622847 530 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC010872.1-201ENST00000624225 675 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC073488.9-201ENST00000631601 754 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC005702.3-201ENST00000585345 1447 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC023245.2-201ENST00000530760 2978 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 LINC01613-201ENST00000561476 2780 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AL359195.2-201ENST00000623657 4412 ntBASIC6.04□□□□□ -1.44
LRFN1Q9P244 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRFN1Q9P244 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.04□□□□□ -1.44
LRFN1Q9P244 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 SNX18P3-202ENST00000565670 1750 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms