Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 SNORD35A-201ENST00000363389 86 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 SNORD8-201ENST00000363915 110 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 LCN1P2-201ENST00000372030 223 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AL079341.1-201ENST00000404701 1207 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 RPL23AP85-201ENST00000421838 433 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 NPM1P25-201ENST00000429734 854 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 BX679664.2-201ENST00000439282 283 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 HMGN1P32-201ENST00000441744 256 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 TXNP2-201ENST00000443918 295 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 MGAT2P1-201ENST00000449718 797 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AL122001.1-201ENST00000457027 370 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC093720.1-201ENST00000505681 714 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC084824.2-201ENST00000548906 345 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PRELID3BP3-201ENST00000584963 545 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 RPL29P33-201ENST00000587474 316 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 RPS27AP19-201ENST00000597285 458 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC011500.1-201ENST00000601963 469 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AP000894.4-201ENST00000610185 483 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC096586.2-201ENST00000610260 441 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AL035425.4-201ENST00000624509 1063 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC009831.5-201ENST00000624000 3189 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC012321.1-201ENST00000561622 1588 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 AC092701.1-201ENST00000623627 1551 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 CASC19-238ENST00000641523 1558 ntBASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHAMP1Q96JM3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC027575.3-201ENST00000583058 2747 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RN7SKP15-201ENST00000364742 309 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RN7SKP91-201ENST00000410852 288 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 ZNF965P-201ENST00000432501 817 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 ELOCP11-201ENST00000436690 332 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC234771.4-201ENST00000441416 730 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 ELOCP16-201ENST00000444494 332 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 TVP23CP1-201ENST00000450317 639 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AL009048.1-201ENST00000450437 298 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC093166.2-201ENST00000455969 1017 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RN7SL492P-201ENST00000460700 295 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RN7SL868P-201ENST00000485915 303 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC005412.2-201ENST00000492004 341 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC010627.1-201ENST00000503819 1294 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC122718.2-201ENST00000505325 591 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC116917.1-201ENST00000520558 305 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 OR8G5-201ENST00000524943 1041 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AL162632.2-201ENST00000553933 399 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 MIR4443-201ENST00000585052 53 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AP000676.4-201ENST00000624659 623 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC126544.2-201ENST00000625174 749 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 FBXL21-201ENST00000297158 1305 ntBASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHAMP1Q96JM3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms