Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC008833.1-201ENST00000611633 691 ntBASIC6.08□□□□□ -1.44
VMP1Q96GC9 AC010998.3-201ENST00000613871 631 ntBASIC6.08□□□□□ -1.44
VMP1Q96GC9 MIR6823-201ENST00000622118 61 ntBASIC6.08□□□□□ -1.44
VMP1Q96GC9 AC089999.3-201ENST00000622440 577 ntBASIC6.08□□□□□ -1.44
VMP1Q96GC9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.08□□□□□ -1.44
VMP1Q96GC9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VMP1Q96GC9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VMP1Q96GC9 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC016745.2-201ENST00000608834 3443 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 MIR365B-201ENST00000362317 111 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 RNA5SP485-201ENST00000365053 119 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 RNA5SP105-201ENST00000391123 113 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AL360013.1-201ENST00000419031 858 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CLNS1AP1-201ENST00000435954 682 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC002553.2-201ENST00000453217 340 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 SLC25A51P1-201ENST00000468432 871 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC022336.1-201ENST00000475510 337 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC098818.1-201ENST00000478593 252 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 RPL5P14-201ENST00000494197 878 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC008676.3-201ENST00000521237 435 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AP001000.1-201ENST00000526843 742 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 MT1CP-201ENST00000567054 174 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC133552.4-201ENST00000576103 676 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC063977.7-201ENST00000594454 337 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AL157899.1-201ENST00000604110 936 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC011891.2-201ENST00000604949 397 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC093388.1-201ENST00000609166 430 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 MIR6085-201ENST00000618314 110 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AC006213.6-201ENST00000623722 4179 ntBASIC6.07□□□□□ -1.44
VMP1Q96GC9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VMP1Q96GC9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.07□□□□□ -1.44
VMP1Q96GC9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VMP1Q96GC9 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VMP1Q96GC9 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VMP1Q96GC9 PRELID1P1-201ENST00000403549 660 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 RPL23AP85-201ENST00000421838 433 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 RPL7AP51-201ENST00000422016 760 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 AL139415.1-201ENST00000424862 352 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 NPM1P19-201ENST00000450070 712 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VMP1Q96GC9 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 YRDCP3-201ENST00000456507 480 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.06□□□□□ -1.44
VMP1Q96GC9 AC005165.2-201ENST00000466070 380 ntBASIC6.06□□□□□ -1.44
VMP1Q96GC9 RPL29P23-201ENST00000486188 442 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms