Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC244502.2-201ENST00000543361 851 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC073488.3-201ENST00000631611 778 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AL137141.1-201ENST00000624622 4836 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 GNL2P1-201ENST00000451274 2190 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AL592429.1-201ENST00000403909 1473 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AP002512.4-202ENST00000641599 4530 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 GNG5P2-201ENST00000372054 207 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AL354893.1-201ENST00000433735 348 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC097463.1-201ENST00000447288 481 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 YRDCP3-201ENST00000456507 480 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC104164.1-201ENST00000460282 590 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 SNRPCP3-201ENST00000474888 476 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC009879.1-201ENST00000520029 839 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC110056.1-201ENST00000525759 911 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC124916.2-201ENST00000604416 224 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 MIR6889-201ENST00000613185 59 ntBASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC65Q8IXS2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 SNRPEP6-201ENST00000407465 277 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 SUMO2P8-201ENST00000434672 286 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AC009963.4-201ENST00000448535 339 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AC092865.4-201ENST00000477936 615 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 EIF4E2P2-201ENST00000492033 736 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AL117692.1-201ENST00000494283 713 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 PRMT5P1-201ENST00000514351 598 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 RN7SKP288-201ENST00000516227 268 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 RN7SKP183-201ENST00000517169 324 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AC068768.2-201ENST00000602352 343 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AL359091.2-201ENST00000609303 556 ntBASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms