Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL442128.2-201ENST00000620246 1824 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 RN7SKP250-201ENST00000363924 321 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL139158.1-201ENST00000424719 340 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 RPSAP65-201ENST00000429660 595 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC108479.1-201ENST00000431142 427 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 GAPDHP59-201ENST00000435908 267 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC023141.3-201ENST00000436698 278 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL663074.2-201ENST00000440621 479 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 RPS7P3-201ENST00000443360 580 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 BTG1P1-201ENST00000540396 508 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC011500.1-201ENST00000601963 469 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL138960.1-201ENST00000613838 513 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 HTR1DP1-201ENST00000616500 888 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AC244100.4-201ENST00000617747 388 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL445670.1-201ENST00000618889 801 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL109924.4-201ENST00000623089 670 ntBASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 Z95114.1-201ENST00000624264 14574 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 OR2W4P-201ENST00000406496 926 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 RPSAP40-201ENST00000442343 891 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 RSU1P1-201ENST00000453416 441 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 RPL38P3-201ENST00000484463 213 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 RN7SL568P-201ENST00000493069 298 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 RN7SL612P-201ENST00000497704 295 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC008629.2-201ENST00000503783 483 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 OR7E99P-201ENST00000505750 922 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 ST13P12-201ENST00000508958 1094 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 OR4A41P-201ENST00000533053 928 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL163952.1-202ENST00000569625 600 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 MIR4420-201ENST00000583944 77 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AL352984.2-202ENST00000613699 155 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 uc_338.31-201ENST00000615595 186 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC241377.1-201ENST00000619797 406 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 AC073488.3-201ENST00000631611 778 ntBASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDKL3Q8IVW4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms