Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 RNA5SP478-201ENST00000364657 115 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 UBE2V1P14-201ENST00000415815 558 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC090543.1-201ENST00000492168 485 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 RNU6-889P-201ENST00000517189 103 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 ADAD1P2-201ENST00000588476 646 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 AP001267.4-201ENST00000602598 545 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 RMST_5.1-201ENST00000618704 126 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 MIR7854-201ENST00000620068 65 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 AC114876.1-201ENST00000490962 1366 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 SAGE3P-201ENST00000619800 1635 ntBASIC6.53□□□□□ -1.36
CCDC38Q502W7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC38Q502W7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC38Q502W7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
CCDC38Q502W7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CCDC38Q502W7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 MTND5P23-201ENST00000430812 1655 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 RBPJP6-201ENST00000411556 1431 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 SHQ1P1-201ENST00000437111 1544 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 RNU1-5P-201ENST00000362684 144 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 MRPS21P5-201ENST00000417885 231 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 VN1R53P-201ENST00000429536 957 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AL157884.3-201ENST00000448273 1184 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC092967.1-201ENST00000449016 481 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 MTND2P25-201ENST00000449028 610 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC063955.1-201ENST00000462872 685 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 FABP5P6-201ENST00000510588 409 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC008126.1-201ENST00000549019 480 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 HMGN2P47-201ENST00000559378 272 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC092718.4-201ENST00000566639 716 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 MIR6070-201ENST00000613967 103 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 AC022726.2-201ENST00000634673 547 ntBASIC6.52□□□□□ -1.37
CCDC38Q502W7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms