Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL591135.1-201ENST00000401578 5914 ntBASIC5.59□□□□□ -1.52
SOX2P48431 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SOX2P48431 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.59□□□□□ -1.52
SOX2P48431 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SOX2P48431 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AC110373.1-201ENST00000505994 3505 ntBASIC5.58□□□□□ -1.52
SOX2P48431 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AC119674.1-202ENST00000641333 1860 ntBASIC5.58□□□□□ -1.52
SOX2P48431 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 TUBBP10-201ENST00000427668 1301 ntBASIC5.58□□□□□ -1.52
SOX2P48431 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SOX2P48431 RNA5SP355-201ENST00000365317 135 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC007618.1-201ENST00000366455 732 ntBASIC5.58□□□□□ -1.52
SOX2P48431 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 RPLP1P10-201ENST00000413972 339 ntBASIC5.58□□□□□ -1.52
SOX2P48431 OR51A6P-201ENST00000418680 1004 ntBASIC5.58□□□□□ -1.52
SOX2P48431 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SOX2P48431 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 CLNS1AP1-201ENST00000435954 682 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 RNFT1P2-201ENST00000443064 757 ntBASIC5.58□□□□□ -1.52
SOX2P48431 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.58□□□□□ -1.52
SOX2P48431 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SOX2P48431 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 RPS4XP19-201ENST00000460237 736 ntBASIC5.58□□□□□ -1.52
SOX2P48431 UOX-201ENST00000471089 899 ntBASIC5.58□□□□□ -1.52
SOX2P48431 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 PPM1AP1-201ENST00000502740 1135 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.58□□□□□ -1.52
SOX2P48431 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 AC106800.3-201ENST00000511389 308 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 AC004923.2-201ENST00000529649 369 ntBASIC5.58□□□□□ -1.52
SOX2P48431 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.58□□□□□ -1.52
SOX2P48431 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AC139697.1-201ENST00000548429 745 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX2P48431 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AF186192.2-204ENST00000581667 524 ntBASIC5.58□□□□□ -1.52
SOX2P48431 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.58□□□□□ -1.52
SOX2P48431 MTCO3P22-201ENST00000603219 784 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC006946.3-201ENST00000609791 756 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AP005229.2-201ENST00000609980 697 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC004839.1-201ENST00000610269 501 ntBASIC5.58□□□□□ -1.52
SOX2P48431 U1.41-201ENST00000617626 165 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC048344.4-201ENST00000619744 527 ntBASIC5.58□□□□□ -1.52
SOX2P48431 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 AP003486.1-201ENST00000525716 3994 ntBASIC5.58□□□□□ -1.52
SOX2P48431 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX2P48431 AL132656.3-201ENST00000606384 1595 ntBASIC5.58□□□□□ -1.52
SOX2P48431 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX2P48431 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SOX2P48431 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX2P48431 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 AP002512.4-202ENST00000641599 4530 ntBASIC5.57□□□□□ -1.52
SOX2P48431 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms