Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 RN7SKP77-201ENST00000363261 353 ntBASIC5.03□□□□□ -1.6
CD74P04233 RN7SKP145-201ENST00000363291 303 ntBASIC5.03□□□□□ -1.6
CD74P04233 RNA5SP211-201ENST00000365516 117 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC026310.1-201ENST00000396004 378 ntBASIC5.03□□□□□ -1.6
CD74P04233 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.03□□□□□ -1.6
CD74P04233 AC002127.1-201ENST00000421305 225 ntBASIC5.03□□□□□ -1.6
CD74P04233 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.03□□□□□ -1.6
CD74P04233 AL136231.1-201ENST00000429407 730 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC112492.2-201ENST00000432774 1030 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC096775.1-201ENST00000437724 448 ntBASIC5.03□□□□□ -1.6
CD74P04233 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 PA2G4P1-201ENST00000442248 1197 ntBASIC5.03□□□□□ -1.6
CD74P04233 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 RBMY2EP-202ENST00000456360 940 ntBASIC5.03□□□□□ -1.6
CD74P04233 RN7SL70P-201ENST00000478322 302 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.03□□□□□ -1.6
CD74P04233 AC114940.1-201ENST00000512162 1265 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.03□□□□□ -1.6
CD74P04233 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 RBMS2P1-201ENST00000525031 1226 ntBASIC5.03□□□□□ -1.6
CD74P04233 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 AC008055.1-201ENST00000547032 609 ntBASIC5.03□□□□□ -1.6
CD74P04233 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.03□□□□□ -1.6
CD74P04233 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 TXNP4-201ENST00000575018 310 ntBASIC5.03□□□□□ -1.6
CD74P04233 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.03□□□□□ -1.6
CD74P04233 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.03□□□□□ -1.6
CD74P04233 AC244100.4-201ENST00000617747 388 ntBASIC5.03□□□□□ -1.6
CD74P04233 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CD74P04233 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 MTCO1P7-201ENST00000419523 1542 ntBASIC5.02□□□□□ -1.61
CD74P04233 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.02□□□□□ -1.61
CD74P04233 CDY11P-201ENST00000447168 1651 ntBASIC5.02□□□□□ -1.61
CD74P04233 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CD74P04233 RNA5SP429-201ENST00000363688 109 ntBASIC5.02□□□□□ -1.61
CD74P04233 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CD74P04233 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CD74P04233 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CD74P04233 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.02□□□□□ -1.61
CD74P04233 DHFRP2-201ENST00000414224 547 ntBASIC5.02□□□□□ -1.61
CD74P04233 RANP7-201ENST00000418085 644 ntBASIC5.02□□□□□ -1.61
CD74P04233 HMGN2P27-201ENST00000427352 270 ntBASIC5.02□□□□□ -1.61
CD74P04233 RPS10P14-201ENST00000440748 502 ntBASIC5.02□□□□□ -1.61
CD74P04233 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 CYCSP51-201ENST00000443545 318 ntBASIC5.02□□□□□ -1.61
CD74P04233 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.02□□□□□ -1.61
CD74P04233 AC009244.1-201ENST00000450566 258 ntBASIC5.02□□□□□ -1.61
CD74P04233 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.02□□□□□ -1.61
CD74P04233 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 OR7E158P-201ENST00000524483 910 ntBASIC5.02□□□□□ -1.61
CD74P04233 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 AP004609.2-201ENST00000532177 190 ntBASIC5.02□□□□□ -1.61
CD74P04233 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.02□□□□□ -1.61
CD74P04233 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.02□□□□□ -1.61
CD74P04233 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.02□□□□□ -1.61
CD74P04233 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.02□□□□□ -1.61
CD74P04233 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.02□□□□□ -1.61
CD74P04233 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.02□□□□□ -1.61
CD74P04233 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD74P04233 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.02□□□□□ -1.61
CD74P04233 AC010503.3-201ENST00000594355 540 ntBASIC5.02□□□□□ -1.61
CD74P04233 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.02□□□□□ -1.61
CD74P04233 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms