Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 AC090826.1-203ENST00000569235 490 ntBASIC6□□□□□ -1.45
LDLRP01130 GLYATL1P2-202ENST00000588046 902 ntBASIC6□□□□□ -1.45
LDLRP01130 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6□□□□□ -1.45
LDLRP01130 AL583832.1-201ENST00000603227 784 ntBASIC6□□□□□ -1.45
LDLRP01130 AP003400.2-201ENST00000624036 666 ntBASIC6□□□□□ -1.45
LDLRP01130 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6□□□□□ -1.45
LDLRP01130 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6□□□□□ -1.45
LDLRP01130 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 OR4G1P-202ENST00000641173 1788 ntBASIC6□□□□□ -1.45
LDLRP01130 MAPK10-287ENST00000641217 3037 ntBASIC6□□□□□ -1.45
LDLRP01130 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6□□□□□ -1.45
LDLRP01130 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 MTCO1P11-201ENST00000429111 1528 ntBASIC5.99□□□□□ -1.45
LDLRP01130 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.99□□□□□ -1.45
LDLRP01130 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 AC015799.1-201ENST00000622996 3122 ntBASIC5.99□□□□□ -1.45
LDLRP01130 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
LDLRP01130 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.99□□□□□ -1.45
LDLRP01130 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.99□□□□□ -1.45
LDLRP01130 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.99□□□□□ -1.45
LDLRP01130 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.99□□□□□ -1.45
LDLRP01130 AL359092.1-201ENST00000417156 265 ntBASIC5.99□□□□□ -1.45
LDLRP01130 RPL23AP85-201ENST00000421838 433 ntBASIC5.99□□□□□ -1.45
LDLRP01130 RPSAP65-201ENST00000429660 595 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC097523.2-201ENST00000435551 652 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.99□□□□□ -1.45
LDLRP01130 AL512637.1-201ENST00000439523 1231 ntBASIC5.99□□□□□ -1.45
LDLRP01130 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LDLRP01130 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 NPM1P19-201ENST00000450070 712 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.99□□□□□ -1.45
LDLRP01130 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.99□□□□□ -1.45
LDLRP01130 MTND3P6-201ENST00000485242 339 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC022206.1-201ENST00000495947 347 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.99□□□□□ -1.45
LDLRP01130 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.99□□□□□ -1.45
LDLRP01130 AC147055.1-201ENST00000509261 750 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC108103.1-201ENST00000511286 446 ntBASIC5.99□□□□□ -1.45
LDLRP01130 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 NANOGNBP2-201ENST00000544753 553 ntBASIC5.99□□□□□ -1.45
LDLRP01130 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LDLRP01130 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 AC023389.2-201ENST00000580031 955 ntBASIC5.99□□□□□ -1.45
LDLRP01130 NPM1P45-201ENST00000583151 559 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC008521.2-201ENST00000591021 259 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.99□□□□□ -1.45
LDLRP01130 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.99□□□□□ -1.45
LDLRP01130 AC069234.4-201ENST00000621276 412 ntBASIC5.99□□□□□ -1.45
LDLRP01130 AL357140.4-201ENST00000636827 412 ntBASIC5.99□□□□□ -1.45
LDLRP01130 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.99□□□□□ -1.45
LDLRP01130 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LDLRP01130 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
LDLRP01130 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 Z95114.1-201ENST00000624264 14574 ntBASIC5.98□□□□□ -1.45
LDLRP01130 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LDLRP01130 U3.52-201ENST00000384034 216 ntBASIC5.98□□□□□ -1.45
LDLRP01130 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.98□□□□□ -1.45
LDLRP01130 RN7SKP151-201ENST00000410230 316 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AL035422.1-201ENST00000414193 397 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.98□□□□□ -1.45
LDLRP01130 CHEK2P5-201ENST00000423877 246 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 AC007688.1-201ENST00000475592 759 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AC074386.1-201ENST00000476560 767 ntBASIC5.98□□□□□ -1.45
LDLRP01130 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.98□□□□□ -1.45
LDLRP01130 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.98□□□□□ -1.45
LDLRP01130 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.98□□□□□ -1.45
LDLRP01130 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.98□□□□□ -1.45
LDLRP01130 AC008429.2-201ENST00000523057 864 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms