Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC013444.2-201ENST00000603317 787 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC009948.4-201ENST00000604692 675 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AL121809.2-201ENST00000613169 341 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC048341.3-201ENST00000619323 491 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC091304.6-201ENST00000619761 202 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AL596275.2-207ENST00000641188 675 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AL354702.2-202ENST00000641481 890 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AL591848.4-201ENST00000567832 3472 ntBASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TRIM55Q9BYV6 AC083806.2-201ENST00000617795 2685 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 SNORA73B-201ENST00000363217 204 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RNA5SP512-201ENST00000364550 120 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 CD2-201ENST00000369477 478 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 LRRC37BP1-201ENST00000398851 714 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 MIR541-201ENST00000401360 84 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 HMGB3P18-201ENST00000406327 590 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RPS21P8-201ENST00000413365 247 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 BTF3P8-201ENST00000414577 526 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 MICG-208ENST00000416822 132 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 EMC3-AS1-205ENST00000438698 534 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RPL34P26-201ENST00000445636 354 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL050341.1-201ENST00000447743 313 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL035407.2-201ENST00000454090 378 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RN7SL251P-201ENST00000464175 297 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RN7SL688P-201ENST00000471754 275 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 NDUFA5P9-201ENST00000472609 340 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC022730.1-201ENST00000473114 568 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 RN7SL259P-201ENST00000478499 253 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC063943.2-201ENST00000495697 534 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 FTH1P8-201ENST00000498161 514 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 MTND6P8-201ENST00000503471 522 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC119751.1-201ENST00000513357 765 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 OR5M4P-201ENST00000529436 925 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 OR6M3P-201ENST00000531567 700 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC087257.2-201ENST00000538759 928 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 GARSP1-201ENST00000570895 719 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AP002884.5-201ENST00000595053 1132 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC021171.1-201ENST00000603137 706 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC005070.2-201ENST00000604391 260 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC013468.1-201ENST00000608680 598 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL161931.1-201ENST00000612768 246 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC007671.1-201ENST00000616957 830 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC243830.2-201ENST00000618067 630 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AP002782.1-201ENST00000623107 614 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC119674.1-212ENST00000641155 993 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms