Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RN7SL131P-201ENST00000579043 256 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 BPTFP1-201ENST00000579209 492 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 BNIP3P26-201ENST00000600827 554 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AL031281.1-201ENST00000604049 488 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC092960.1-201ENST00000604762 351 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AP005137.2-201ENST00000609238 400 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC107075.1-201ENST00000613695 314 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC009283.1-201ENST00000615852 645 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC099667.1-201ENST00000624222 469 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC073488.2-201ENST00000631903 751 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC099654.15-201ENST00000639802 509 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC241584.2-201ENST00000637142 2090 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC106872.5-201ENST00000508856 1416 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RNU6-707P-201ENST00000364647 95 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC093719.1-202ENST00000392735 373 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 SNORA3.1-201ENST00000408166 111 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC007435.1-201ENST00000421086 415 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AL022100.1-202ENST00000421214 548 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC073900.1-201ENST00000429766 776 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 GTF2IP7-202ENST00000436677 309 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RPL5P27-201ENST00000437011 881 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 USP9YP22-201ENST00000438971 294 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 MTCYBP34-201ENST00000439552 670 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RPS7P5-201ENST00000441482 581 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AL035551.1-201ENST00000446931 348 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC093799.1-201ENST00000452411 499 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RN7SL456P-201ENST00000469290 295 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC090114.3-201ENST00000479267 829 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AL035404.1-201ENST00000497982 568 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 SSX8-201ENST00000506270 579 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC026782.2-201ENST00000510845 636 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC022296.2-201ENST00000512424 202 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC079171.1-201ENST00000568788 914 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC002400.1-201ENST00000569310 726 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 MIR4675-201ENST00000577898 77 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RN7SL14P-201ENST00000579715 298 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC245407.2-201ENST00000614199 451 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC139792.2-201ENST00000624218 587 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 WNK1-220ENST00000574564 1401 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms