Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 MIR1275-201ENST00000408770 80 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 HMGB1P49-201ENST00000418882 569 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 DLGAP5P1-201ENST00000430307 464 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC234771.2-201ENST00000445718 597 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 RPS3AP43-201ENST00000479743 781 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC096743.1-201ENST00000485172 319 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC007068.2-201ENST00000543168 395 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC084824.1-201ENST00000550917 1005 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC025283.1-201ENST00000572039 734 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AL589765.6-201ENST00000601909 549 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC107304.1-201ENST00000604229 296 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC064872.1-201ENST00000604823 1072 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AP005329.3-201ENST00000609924 686 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC089999.3-201ENST00000622440 577 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 AC073592.6-201ENST00000624271 415 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 TET1P1-201ENST00000426627 2301 ntBASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNGAP1Q96PV0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 Y_RNA.51-201ENST00000362725 102 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL391419.1-201ENST00000398901 1275 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 QRSL1P2-201ENST00000418582 964 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 GSTA6P-201ENST00000424144 582 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 OR6R1P-201ENST00000431838 940 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 MORF4L1P5-201ENST00000433352 961 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC021074.2-201ENST00000468434 172 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RN7SL216P-201ENST00000471607 298 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC131233.1-201ENST00000479200 955 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 FABP5P6-201ENST00000510588 409 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC024909.2-201ENST00000553035 286 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL590032.1-201ENST00000604920 252 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AP002345.2-201ENST00000609961 904 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL356752.1-201ENST00000615844 593 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC006328.2-201ENST00000623198 397 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC073530.2-201ENST00000623987 261 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC012005.2-201ENST00000624333 397 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC061999.1-201ENST00000624454 177 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms