Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SNORA17.5-201ENST00000630429 132 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ZNF812P-201ENST00000457674 1694 ntBASIC6.33□□□□□ -1.4
HMGB4Q8WW32 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGB4Q8WW32 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 RNU4-39P-201ENST00000362455 127 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 RNA5SP477-201ENST00000362639 119 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 SNORA27.3-201ENST00000364937 134 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 RPL23AP19-201ENST00000436229 369 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 OR3D1P-201ENST00000438288 955 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC002553.3-201ENST00000453002 341 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 CST12P-201ENST00000457644 362 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 PPIAP19-201ENST00000486414 492 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 PSMA2P2-201ENST00000504319 686 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC019227.1-201ENST00000526902 510 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 OR4R2P-201ENST00000530815 597 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 MIR7159-201ENST00000620587 66 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 LINC00216-201ENST00000623548 1126 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AL132640.3-201ENST00000630473 177 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC008627.1-201ENST00000517511 1704 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 AC068733.2-201ENST00000605434 1418 ntBASIC6.32□□□□□ -1.4
HMGB4Q8WW32 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
HMGB4Q8WW32 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MTCO1P11-201ENST00000429111 1528 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC112243.1-201ENST00000623949 3851 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SNORA21-201ENST00000362423 132 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AL132875.1-201ENST00000403623 949 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 RN7SKP229-201ENST00000410465 302 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 TRIM60P17-201ENST00000415181 719 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CHEK2P5-201ENST00000423877 246 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AL139415.1-201ENST00000424862 352 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 NXT1P1-201ENST00000458481 316 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC007998.1-201ENST00000474156 672 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MTND3P24-201ENST00000506306 329 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CR383658.1-201ENST00000514609 734 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms