Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RPL9P21-201ENST00000392269 505 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 GTF2IP7-202ENST00000436677 309 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 RPS24P1-201ENST00000438550 371 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 FGF7P5-201ENST00000441829 291 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 WDR82P2-201ENST00000444540 928 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX4Q06945 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 AL121578.2-201ENST00000448797 447 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 YRDCP3-201ENST00000456507 480 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 RPS26P11-201ENST00000463445 348 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 RPS26P6-201ENST00000475156 348 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 RPL7P40-201ENST00000481703 745 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 RPL5P33-201ENST00000487833 905 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC067904.2-201ENST00000517322 1283 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 TMEM97P2-201ENST00000517841 403 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AP005902.2-201ENST00000518393 307 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC087752.2-201ENST00000521219 281 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 OR4A21P-201ENST00000532759 944 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AL020997.3-201ENST00000602843 359 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 MTCO3P22-201ENST00000603219 784 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AP002906.1-201ENST00000603405 233 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AF250324.2-201ENST00000608299 610 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC211486.4-201ENST00000621495 113 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC027559.1-201ENST00000636288 271 ntBASIC7.43□□□□□ -1.22
SOX4Q06945 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX4Q06945 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX4Q06945 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX4Q06945 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX4Q06945 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SOX4Q06945 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AC034111.1-201ENST00000562143 3770 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 DLEU2L-201ENST00000371086 3555 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 RNU6-224P-201ENST00000384055 107 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 Y_RNA.517-201ENST00000384551 106 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 ATP5F1P3-201ENST00000397213 657 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 ZNF603P-201ENST00000405613 487 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AHCYP8-201ENST00000425108 209 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 BX119904.1-201ENST00000432026 348 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AL606490.7-201ENST00000433136 191 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC013403.1-201ENST00000436954 263 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC064862.5-201ENST00000440618 334 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC234771.4-201ENST00000441416 730 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AL357520.1-201ENST00000441557 453 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 AL034399.1-201ENST00000451535 380 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 MTCYBP1-201ENST00000454315 1119 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 NECAP1P2-201ENST00000455668 727 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 RN7SL836P-201ENST00000476140 296 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 MTAPP1-201ENST00000489154 819 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 RPS10P20-201ENST00000494130 463 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 SSX8-201ENST00000506270 579 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 NACAP5-201ENST00000509863 636 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms