Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 OR10R3P-201ENST00000361688 942 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 RNU1-134P-201ENST00000362935 165 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC121334.1-201ENST00000396414 802 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC108479.1-201ENST00000431142 427 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 RNA5SP441-201ENST00000516809 88 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC110056.1-201ENST00000525759 911 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 MRPS21P8-201ENST00000569196 235 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 OR1E3-201ENST00000575608 948 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 RFPL4AP6-201ENST00000616792 846 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AL512652.1-201ENST00000619006 500 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC111152.1-202ENST00000635848 339 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC099654.15-201ENST00000639802 509 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC140134.1-201ENST00000511830 3544 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC010401.2-201ENST00000575137 4934 ntBASIC5.26□□□□□ -1.57
HIST1H3AP68431 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.26□□□□□ -1.57
HIST1H3AP68431 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HIST1H3AP68431 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC006600.2-201ENST00000624834 2506 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 RNA5SP211-201ENST00000365516 117 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 U3.23-201ENST00000391132 200 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AL132875.1-201ENST00000403623 949 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 NPM1P38-201ENST00000403835 865 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 NMD3P2-201ENST00000421815 761 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 SETP9-201ENST00000423837 832 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC073410.1-201ENST00000435125 589 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC023141.3-201ENST00000436698 278 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 RPL5P7-201ENST00000444235 813 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 ACA64.4-201ENST00000459070 127 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 RN7SL254P-201ENST00000460609 284 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC083795.1-201ENST00000491760 320 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC113367.2-201ENST00000505749 160 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC002519.2-203ENST00000567043 837 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 OOSP1P2-201ENST00000579644 351 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC006115.2-201ENST00000596823 202 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC073488.3-201ENST00000631611 778 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
HIST1H3AP68431 GNL2P1-201ENST00000451274 2190 ntBASIC5.25□□□□□ -1.57
HIST1H3AP68431 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HIST1H3AP68431 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC079753.1-201ENST00000623243 3868 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC005261.2-201ENST00000593427 4258 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms