Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.68□□□□□ -1.34
COPB1P53618 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.68□□□□□ -1.34
COPB1P53618 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.68□□□□□ -1.34
COPB1P53618 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.68□□□□□ -1.34
COPB1P53618 HIGD1AP16-201ENST00000450986 258 ntBASIC6.68□□□□□ -1.34
COPB1P53618 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.68□□□□□ -1.34
COPB1P53618 TRBV5-2-201ENST00000489095 273 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AC015524.1-201ENST00000491585 472 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.68□□□□□ -1.34
COPB1P53618 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.68□□□□□ -1.34
COPB1P53618 OR4A46P-201ENST00000527255 933 ntBASIC6.68□□□□□ -1.34
COPB1P53618 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.68□□□□□ -1.34
COPB1P53618 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.68□□□□□ -1.34
COPB1P53618 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 KYNUP3-201ENST00000574386 1341 ntBASIC6.68□□□□□ -1.34
COPB1P53618 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COPB1P53618 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COPB1P53618 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.67□□□□□ -1.34
COPB1P53618 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COPB1P53618 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.67□□□□□ -1.34
COPB1P53618 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 POU5F1P5-201ENST00000445059 658 ntBASIC6.67□□□□□ -1.34
COPB1P53618 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 RN7SL168P-201ENST00000463821 279 ntBASIC6.67□□□□□ -1.34
COPB1P53618 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 RPL23AP40-201ENST00000487630 390 ntBASIC6.67□□□□□ -1.34
COPB1P53618 RN7SL104P-201ENST00000498686 293 ntBASIC6.67□□□□□ -1.34
COPB1P53618 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 OR8K2P-201ENST00000524645 927 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AP003080.1-202ENST00000526526 915 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.67□□□□□ -1.34
COPB1P53618 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.67□□□□□ -1.34
COPB1P53618 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 AC025283.1-201ENST00000572039 734 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AC020978.7-201ENST00000575953 1187 ntBASIC6.67□□□□□ -1.34
COPB1P53618 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.67□□□□□ -1.34
COPB1P53618 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 MIR6885-201ENST00000612241 66 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AC253576.2-201ENST00000618815 580 ntBASIC6.67□□□□□ -1.34
COPB1P53618 AC211486.4-201ENST00000621495 113 ntBASIC6.67□□□□□ -1.34
COPB1P53618 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 AC004808.2-201ENST00000627965 773 ntBASIC6.67□□□□□ -1.34
COPB1P53618 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.67□□□□□ -1.34
COPB1P53618 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.67□□□□□ -1.34
COPB1P53618 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPB1P53618 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.66□□□□□ -1.34
COPB1P53618 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.66□□□□□ -1.34
COPB1P53618 MAPK10-261ENST00000641050 3109 ntBASIC6.66□□□□□ -1.34
COPB1P53618 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COPB1P53618 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 AL161756.3-201ENST00000641216 2071 ntBASIC6.66□□□□□ -1.34
COPB1P53618 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COPB1P53618 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COPB1P53618 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COPB1P53618 RNA5SP485-201ENST00000365053 119 ntBASIC6.66□□□□□ -1.34
COPB1P53618 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms