Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 CTSLP6-201ENST00000458273 1002 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 RN7SL352P-201ENST00000466002 277 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC021006.1-201ENST00000489849 553 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 RN7SL362P-201ENST00000494228 267 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC011853.1-201ENST00000518911 454 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC008429.4-201ENST00000521201 182 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 DPPA3P2-202ENST00000557188 1219 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 NPM1P5-201ENST00000557228 838 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC026898.1-201ENST00000586404 571 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC008555.7-201ENST00000605008 583 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC141002.1-201ENST00000607025 279 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 uc_338.26-201ENST00000612659 160 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 MIR6811-201ENST00000620409 58 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC073593.1-201ENST00000624500 411 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AP001052.1-201ENST00000626421 99 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 RNA5SP279-201ENST00000365513 117 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 SNORA77.2-201ENST00000408571 112 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC094019.1-201ENST00000434678 472 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 RPS3AP38-201ENST00000435889 763 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 OR2L9P-201ENST00000444456 913 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 snoU13.29-201ENST00000459370 104 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC108751.3-201ENST00000461814 1020 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 RN7SL170P-201ENST00000487098 295 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 NPM1P21-201ENST00000513394 762 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 CYP4F27P-201ENST00000514557 494 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 RN7SKP70-201ENST00000516655 271 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 NPIPB14P-203ENST00000532298 987 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AL078601.3-201ENST00000573303 535 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 AC093388.1-201ENST00000609166 430 ntBASIC4.61□□□□□ -1.67
HLA-DMBP28068 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMBP28068 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMBP28068 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms