Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.62□□□□□ -1.51
MT-ND1P03886 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 RPSAP40-201ENST00000442343 891 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 OR2L9P-201ENST00000444456 913 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 SNRPCP3-201ENST00000474888 476 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC124891.1-201ENST00000536322 519 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 NPM1P5-201ENST00000557228 838 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.62□□□□□ -1.51
MT-ND1P03886 HMGN2P47-201ENST00000559378 272 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MT-ND1P03886 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.62□□□□□ -1.51
MT-ND1P03886 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MT-ND1P03886 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 RNA5SP453-201ENST00000362503 119 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
MT-ND1P03886 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 OR5W1P-201ENST00000423705 938 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 EIF3EP1-201ENST00000433978 1316 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 PSMD8P1-201ENST00000436275 769 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AL031681.1-201ENST00000443304 400 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RPL23AP60-201ENST00000450011 454 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RN7SL39P-201ENST00000462264 297 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC022730.1-201ENST00000473114 568 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RPS4XP17-201ENST00000479057 754 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 RPL23AP40-201ENST00000487630 390 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 PPBPP2-201ENST00000513150 1362 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 TDGP1-201ENST00000543961 1229 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.61□□□□□ -1.51
MT-ND1P03886 MIR6811-201ENST00000620409 58 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 AC119674.1-202ENST00000641333 1860 ntBASIC5.61□□□□□ -1.51
MT-ND1P03886 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
MT-ND1P03886 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MT-ND1P03886 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MT-ND1P03886 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MT-ND1P03886 AC022325.1-201ENST00000502748 2199 ntBASIC5.6□□□□□ -1.51
MT-ND1P03886 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MT-ND1P03886 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
MT-ND1P03886 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
MT-ND1P03886 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
MT-ND1P03886 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms