Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL133406.3-201ENST00000606817 541 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL121612.2-201ENST00000612261 482 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC024255.1-201ENST00000614376 102 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC008937.3-201ENST00000606813 1700 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC092111.1-201ENST00000618256 3358 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 OR10R3P-201ENST00000361688 942 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 AL109941.1-201ENST00000401925 229 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AL139128.1-201ENST00000413921 941 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 UBE2V1P14-201ENST00000415815 558 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 RPS26P13-201ENST00000419030 330 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC009220.1-201ENST00000451614 275 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 OR52A4P-202ENST00000481634 799 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 MTND3P6-201ENST00000485242 339 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 OR7A11P-201ENST00000597719 953 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC087763.1-201ENST00000603391 286 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC107905.1-201ENST00000616204 426 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 AL118508.4-201ENST00000624142 1176 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
RAPGEF3O95398 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RAPGEF3O95398 MROH3P-201ENST00000435735 2676 ntBASIC8.95□□□□□ -0.98
RAPGEF3O95398 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 RPL23P2-201ENST00000320371 421 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC008753.1-201ENST00000423096 284 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AZGP1P2-201ENST00000454506 345 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 RPS21P4-201ENST00000487122 248 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 NRBF2P4-201ENST00000520874 850 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC078878.1-201ENST00000539832 958 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 MIR3189-201ENST00000578735 73 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AC105235.1-201ENST00000623208 1816 ntBASIC8.94□□□□□ -0.98
RAPGEF3O95398 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
RAPGEF3O95398 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RAPGEF3O95398 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms