Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC011416.1-201ENST00000514947 1732 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AL133243.2-201ENST00000610331 1621 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RN7SKP81-201ENST00000365603 331 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RN7SKP86-201ENST00000410454 332 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 TIMM8BP2-201ENST00000445940 251 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RPL23AP60-201ENST00000450011 454 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RPL12P30-201ENST00000488389 499 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 Y_RNA.710-201ENST00000516975 110 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC093524.1-201ENST00000564266 1094 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC002519.2-203ENST00000567043 837 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC125494.2-201ENST00000602431 657 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RPSAP75-201ENST00000605848 301 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 uc_338.29-201ENST00000615099 168 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC048341.3-201ENST00000619323 491 ntBASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAPPC4Q9Y296 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC016745.2-201ENST00000608834 3443 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC092865.3-201ENST00000425390 1026 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 RPS3AP38-201ENST00000435889 763 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 CLNS1AP1-201ENST00000435954 682 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC010240.2-201ENST00000445363 1205 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AP002453.1-201ENST00000492327 668 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC106822.1-201ENST00000502647 526 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC092349.1-201ENST00000504903 310 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 BMS1P16-201ENST00000556075 1147 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL049779.3-201ENST00000557141 606 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC008555.7-201ENST00000605008 583 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC005828.7-201ENST00000607331 556 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC073389.3-201ENST00000609434 935 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL080312.2-201ENST00000613001 630 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 uc_338.31-201ENST00000615595 186 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL589935.2-201ENST00000616471 1231 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AL137067.2-201ENST00000621202 131 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 OR7A1P-202ENST00000641542 1158 ntBASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 AC009962.1-201ENST00000567327 3813 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms