Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AP003175.1-201ENST00000641383 6658 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RN7SKP69-201ENST00000365390 305 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC008429.4-201ENST00000521201 182 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC090651.1-201ENST00000567865 634 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC005224.3-201ENST00000584683 2140 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 MIR6729-201ENST00000618194 65 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 MIR4302-201ENST00000638058 60 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AL161901.1-201ENST00000624954 3425 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC012213.2-201ENST00000562917 4597 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AL161756.3-201ENST00000641216 2071 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 BMS1P10-201ENST00000443754 1120 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 HMGN1P36-201ENST00000446623 298 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 RAB28P2-201ENST00000454299 641 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 PSMA2P2-201ENST00000504319 686 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 RNA5SP362-201ENST00000516048 118 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 OR7E158P-201ENST00000524483 910 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 NPM1P45-201ENST00000583151 559 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 MIR6793-201ENST00000612376 63 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 OR13C1P-202ENST00000641378 2919 ntBASIC5.34□□□□□ -1.55
KIAA1549Q9HCM3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KIAA1549Q9HCM3 Z95114.1-201ENST00000624264 14574 ntBASIC5.34□□□□□ -1.56
KIAA1549Q9HCM3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
KIAA1549Q9HCM3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.34□□□□□ -1.56
KIAA1549Q9HCM3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
KIAA1549Q9HCM3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP375-201ENST00000362975 119 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 RN7SKP81-201ENST00000365603 331 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 SNORA11B-201ENST00000408175 129 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL445665.1-202ENST00000452436 324 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC023141.9-201ENST00000458734 412 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL177P-201ENST00000476596 299 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL049779.3-201ENST00000557141 606 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC015802.2-201ENST00000589690 189 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 FAM72A-208ENST00000607379 1139 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 OR8G3P-202ENST00000641572 1255 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 ABCA11P-202ENST00000504019 2110 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms