Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CLHC1Q8NHS4 AC020656.2-201ENST00000613291 5309 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AL161756.3-201ENST00000641216 2071 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC016583.1-201ENST00000624221 2431 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 OR3D1P-201ENST00000438288 955 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 ACA64.4-201ENST00000459070 127 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 RN7SL393P-201ENST00000463588 296 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC138517.1-201ENST00000515724 568 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC027026.1-201ENST00000532323 742 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC244502.2-201ENST00000543361 851 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC022001.1-201ENST00000605193 268 ntBASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CLHC1Q8NHS4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC087516.1-201ENST00000561236 2428 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC068870.3-201ENST00000625077 2536 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 OR10R3P-201ENST00000361688 942 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 RNU11-201ENST00000387069 134 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC021876.1-201ENST00000425959 359 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 USP24P1-201ENST00000433802 779 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AL390879.1-201ENST00000439143 386 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC095052.1-201ENST00000509955 863 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC113191.1-201ENST00000517759 403 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 BMS1P16-201ENST00000556075 1147 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AL360012.1-201ENST00000602813 131 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 MIR6823-201ENST00000622118 61 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 AC239868.2-201ENST00000564237 4527 ntBASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms