Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL136981.1-203ENST00000451452 3844 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 RN7SKP118-201ENST00000364331 330 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPL23AP18-201ENST00000416139 468 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPS3AP37-201ENST00000419176 745 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 ARL2BPP3-201ENST00000421226 480 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPF2P1-201ENST00000424137 906 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL138899.2-201ENST00000439139 499 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPL29P7-201ENST00000440227 457 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 PMS2P11-201ENST00000451831 574 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC005517.1-201ENST00000452091 489 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC093799.1-201ENST00000452411 499 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPL23P10-201ENST00000468780 412 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC096661.1-201ENST00000515870 822 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 RN7SL426P-201ENST00000579106 295 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 RN7SL32P-201ENST00000580514 281 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 SLC25A36P1-201ENST00000590111 465 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL133247.2-201ENST00000603236 482 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL136363.2-201ENST00000604173 851 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC092960.1-201ENST00000604762 351 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AL031601.1-201ENST00000605702 394 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC007490.1-201ENST00000624321 703 ntBASIC7.49□□□□□ -1.21
RNF43Q68DV7 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF43Q68DV7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF43Q68DV7 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC111188.2-201ENST00000529697 1387 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms