Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC135983.3-201ENST00000528049 1226 ntBASIC5.96□□□□□ -1.46
RAE1P78406 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.96□□□□□ -1.46
RAE1P78406 RPA2P3-201ENST00000533268 770 ntBASIC5.96□□□□□ -1.46
RAE1P78406 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.96□□□□□ -1.46
RAE1P78406 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.96□□□□□ -1.46
RAE1P78406 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.96□□□□□ -1.46
RAE1P78406 CCDC58P1-201ENST00000578567 430 ntBASIC5.96□□□□□ -1.46
RAE1P78406 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.96□□□□□ -1.46
RAE1P78406 AL591167.1-201ENST00000607321 456 ntBASIC5.96□□□□□ -1.46
RAE1P78406 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.96□□□□□ -1.46
RAE1P78406 AC018926.1-201ENST00000616335 435 ntBASIC5.96□□□□□ -1.46
RAE1P78406 AC025016.1-201ENST00000616746 682 ntBASIC5.96□□□□□ -1.46
RAE1P78406 AC007683.2-201ENST00000624681 714 ntBASIC5.96□□□□□ -1.46
RAE1P78406 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.96□□□□□ -1.46
RAE1P78406 OR4G3P-201ENST00000633500 913 ntBASIC5.96□□□□□ -1.46
RAE1P78406 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAE1P78406 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAE1P78406 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.96□□□□□ -1.46
RAE1P78406 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.96□□□□□ -1.46
RAE1P78406 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
RAE1P78406 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RAE1P78406 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
RAE1P78406 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAE1P78406 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RAE1P78406 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 RAB5CP1-201ENST00000395972 580 ntBASIC5.95□□□□□ -1.46
RAE1P78406 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 AL353692.2-201ENST00000407054 335 ntBASIC5.95□□□□□ -1.46
RAE1P78406 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 RN7SKP121-201ENST00000410842 305 ntBASIC5.95□□□□□ -1.46
RAE1P78406 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 RAB9AP4-201ENST00000415230 609 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AC079922.1-201ENST00000443291 359 ntBASIC5.95□□□□□ -1.46
RAE1P78406 OR2L9P-201ENST00000444456 913 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC006326.1-201ENST00000445465 787 ntBASIC5.95□□□□□ -1.46
RAE1P78406 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AL049634.1-201ENST00000453770 1720 ntBASIC5.95□□□□□ -1.46
RAE1P78406 MTATP6P14-201ENST00000455189 673 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 RN7SL39P-201ENST00000462264 297 ntBASIC5.95□□□□□ -1.46
RAE1P78406 SLC25A51P1-201ENST00000468432 871 ntBASIC5.95□□□□□ -1.46
RAE1P78406 RPS4XP17-201ENST00000479057 754 ntBASIC5.95□□□□□ -1.46
RAE1P78406 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RAE1P78406 RNU6-319P-201ENST00000516025 108 ntBASIC5.95□□□□□ -1.46
RAE1P78406 RNU6-1334P-201ENST00000516032 105 ntBASIC5.95□□□□□ -1.46
RAE1P78406 Vault.2-201ENST00000516519 98 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC103833.1-201ENST00000517442 172 ntBASIC5.95□□□□□ -1.46
RAE1P78406 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.95□□□□□ -1.46
RAE1P78406 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.95□□□□□ -1.46
RAE1P78406 AC092868.3-201ENST00000560515 784 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.95□□□□□ -1.46
RAE1P78406 AC090651.1-201ENST00000567865 634 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.95□□□□□ -1.46
RAE1P78406 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 MIR212-201ENST00000586026 110 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.95□□□□□ -1.46
RAE1P78406 AC096947.1-201ENST00000603233 470 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AC097641.3-201ENST00000613523 464 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AL050303.3-201ENST00000613704 284 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC245389.2-201ENST00000616023 576 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC242843.1-201ENST00000618702 573 ntBASIC5.95□□□□□ -1.46
RAE1P78406 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AL162377.2-201ENST00000624532 337 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 AL445984.1-201ENST00000637834 659 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AC116667.2-201ENST00000641075 823 ntBASIC5.95□□□□□ -1.46
RAE1P78406 OR7A1P-202ENST00000641542 1158 ntBASIC5.95□□□□□ -1.46
RAE1P78406 AL662795.2-201ENST00000624252 3706 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms