Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.7□□□□□ -1.34
COPB1P53618 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.7□□□□□ -1.34
COPB1P53618 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COPB1P53618 AC037479.1-201ENST00000558361 625 ntBASIC6.7□□□□□ -1.34
COPB1P53618 MIR4732-201ENST00000581873 76 ntBASIC6.7□□□□□ -1.34
COPB1P53618 AL589765.6-201ENST00000601909 549 ntBASIC6.7□□□□□ -1.34
COPB1P53618 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.7□□□□□ -1.34
COPB1P53618 MAPK10-350ENST00000641777 965 ntBASIC6.7□□□□□ -1.34
COPB1P53618 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COPB1P53618 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
COPB1P53618 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.7□□□□□ -1.34
COPB1P53618 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COPB1P53618 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
COPB1P53618 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPB1P53618 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.7□□□□□ -1.34
COPB1P53618 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPB1P53618 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPB1P53618 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.7□□□□□ -1.34
COPB1P53618 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 CAP1P2-201ENST00000417455 1409 ntBASIC6.69□□□□□ -1.34
COPB1P53618 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AL590399.2-201ENST00000427536 309 ntBASIC6.69□□□□□ -1.34
COPB1P53618 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 AC128677.1-201ENST00000436016 442 ntBASIC6.69□□□□□ -1.34
COPB1P53618 DNAJC19P5-201ENST00000443295 316 ntBASIC6.69□□□□□ -1.34
COPB1P53618 CXCR2P1-202ENST00000443392 1074 ntBASIC6.69□□□□□ -1.34
COPB1P53618 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 RARRES2P3-201ENST00000457739 473 ntBASIC6.69□□□□□ -1.34
COPB1P53618 RN7SL39P-201ENST00000462264 297 ntBASIC6.69□□□□□ -1.34
COPB1P53618 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 RN7SL393P-201ENST00000463588 296 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AP003385.3-201ENST00000472498 287 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 AP001960.1-201ENST00000506494 658 ntBASIC6.69□□□□□ -1.34
COPB1P53618 NACAP5-201ENST00000509863 636 ntBASIC6.69□□□□□ -1.34
COPB1P53618 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.69□□□□□ -1.34
COPB1P53618 TOMM22P4-201ENST00000511318 336 ntBASIC6.69□□□□□ -1.34
COPB1P53618 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AC112206.4-201ENST00000515142 405 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 NPM1P42-201ENST00000560329 862 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AL390877.1-201ENST00000605704 214 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 AL136097.3-201ENST00000611097 505 ntBASIC6.69□□□□□ -1.34
COPB1P53618 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.69□□□□□ -1.34
COPB1P53618 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 AL139254.3-201ENST00000641097 674 ntBASIC6.69□□□□□ -1.34
COPB1P53618 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 AC011416.1-201ENST00000514947 1732 ntBASIC6.69□□□□□ -1.34
COPB1P53618 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.69□□□□□ -1.34
COPB1P53618 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPB1P53618 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
COPB1P53618 CASC19-246ENST00000641625 1606 ntBASIC6.68□□□□□ -1.34
COPB1P53618 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 AL359955.1-201ENST00000455242 3275 ntBASIC6.68□□□□□ -1.34
COPB1P53618 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 AC092070.2-203ENST00000598377 3644 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COPB1P53618 AP000568.1-201ENST00000282964 442 ntBASIC6.68□□□□□ -1.34
COPB1P53618 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPB1P53618 AC107977.1-201ENST00000355745 939 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.68□□□□□ -1.34
COPB1P53618 KATNBL1P2-201ENST00000433311 835 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AC094019.1-201ENST00000434678 472 ntBASIC6.68□□□□□ -1.34
COPB1P53618 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms