Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CX3CR1P49238 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CX3CR1P49238 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CR1P49238 PTCD2P2-201ENST00000415579 1095 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AC004890.1-201ENST00000461005 181 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 AC108751.3-201ENST00000461814 1020 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 CR383656.1-201ENST00000484916 377 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 RPL23AP40-201ENST00000487630 390 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 MRPL57P6-201ENST00000506570 309 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 GOLGA5P1-201ENST00000507317 980 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AC095052.1-201ENST00000509955 863 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 SNX18P25-201ENST00000510539 758 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CX3CR1P49238 SETP21-201ENST00000514799 892 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AC021269.1-201ENST00000526860 705 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 AC023310.2-201ENST00000553844 547 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 BMS1P16-201ENST00000556075 1147 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 NPM1P42-201ENST00000560329 862 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 WBP1LP11-201ENST00000586141 328 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 NDUFB9P1-201ENST00000604683 510 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 AL136097.3-201ENST00000611097 505 ntBASIC5.31□□□□□ -1.56
CX3CR1P49238 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CX3CR1P49238 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.31□□□□□ -1.56
CX3CR1P49238 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CR1P49238 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CX3CR1P49238 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CX3CR1P49238 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CX3CR1P49238 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 TET1P1-201ENST00000426627 2301 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC018717.1-201ENST00000457712 1505 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AL133260.1-201ENST00000405720 405 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL139805.1-201ENST00000407837 289 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 RN7SKP166-201ENST00000410812 305 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.3□□□□□ -1.56
CX3CR1P49238 RPL7AP14-201ENST00000424041 802 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 VN1R20P-201ENST00000425215 966 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 RPL5P2-201ENST00000429598 854 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.3□□□□□ -1.56
CX3CR1P49238 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AL590399.4-201ENST00000436561 601 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL356121.1-201ENST00000442911 156 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL512593.1-201ENST00000444758 779 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.3□□□□□ -1.56
CX3CR1P49238 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 CCDC11P1-201ENST00000503137 1162 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.3□□□□□ -1.56
CX3CR1P49238 NPIPB14P-203ENST00000532298 987 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms