Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA9P31269 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 BX323845.3-201ENST00000428215 527 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 BX119321.1-201ENST00000428912 797 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 KATNBL1P2-201ENST00000433311 835 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 OR13K1P-201ENST00000444577 975 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA9P31269 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA9P31269 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 AC083795.1-201ENST00000491760 320 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 RPL7L1P4-201ENST00000513004 707 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 SNORA70.20-201ENST00000516848 126 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA9P31269 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXA9P31269 AC007225.2-201ENST00000562529 256 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA9P31269 AC137695.1-201ENST00000604126 489 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 RN7SL787P-201ENST00000613000 284 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 AC005899.7-201ENST00000618199 588 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 AC110373.1-201ENST00000505994 3505 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 RARSP1-201ENST00000542842 1418 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 NEPNP-201ENST00000404786 1371 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXA9P31269 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 RN7SKP128-201ENST00000364270 303 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 RPL34P3-201ENST00000421454 338 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 AL451136.1-201ENST00000435399 325 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXA9P31269 AP000281.1-201ENST00000444036 316 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 RPL36AP39-201ENST00000445859 318 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 AC074386.1-201ENST00000476560 767 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXA9P31269 CYCSP22-201ENST00000517555 339 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC112191.2-201ENST00000522428 333 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC004477.3-201ENST00000614061 590 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC018659.2-201ENST00000624690 715 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA9P31269 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXA9P31269 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HOXA9P31269 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.34□□□□□ -1.39
HOXA9P31269 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA9P31269 AC119674.1-202ENST00000641333 1860 ntBASIC6.34□□□□□ -1.39
HOXA9P31269 AC024587.1-201ENST00000505925 2157 ntBASIC6.34□□□□□ -1.4
HOXA9P31269 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.4
HOXA9P31269 CR788268.1-201ENST00000603931 1809 ntBASIC6.34□□□□□ -1.4
HOXA9P31269 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
HOXA9P31269 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HOXA9P31269 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HOXA9P31269 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA9P31269 MARK2P12-201ENST00000420129 585 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms