Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 AL161912.4-201ENST00000623889 2468 ntBASIC6.38□□□□□ -1.39
APOEP02649 AC005725.1-201ENST00000577346 2607 ntBASIC6.38□□□□□ -1.39
APOEP02649 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 AC020656.2-201ENST00000613291 5309 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
APOEP02649 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 AC024587.1-201ENST00000505925 2157 ntBASIC6.37□□□□□ -1.39
APOEP02649 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 RNA5SP110-201ENST00000362638 115 ntBASIC6.37□□□□□ -1.39
APOEP02649 RNU1-59P-201ENST00000364829 162 ntBASIC6.37□□□□□ -1.39
APOEP02649 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
APOEP02649 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 AC069154.1-201ENST00000432914 542 ntBASIC6.37□□□□□ -1.39
APOEP02649 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.37□□□□□ -1.39
APOEP02649 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.37□□□□□ -1.39
APOEP02649 PNKDP1-201ENST00000435914 430 ntBASIC6.37□□□□□ -1.39
APOEP02649 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.37□□□□□ -1.39
APOEP02649 RBMY2AP-201ENST00000445405 1157 ntBASIC6.37□□□□□ -1.39
APOEP02649 RBMY2CP-201ENST00000448575 1157 ntBASIC6.37□□□□□ -1.39
APOEP02649 RBMY2DP-202ENST00000448881 1157 ntBASIC6.37□□□□□ -1.39
APOEP02649 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.37□□□□□ -1.39
APOEP02649 RBMY2BP-202ENST00000451071 1156 ntBASIC6.37□□□□□ -1.39
APOEP02649 RPL7L1P3-201ENST00000455249 689 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC068228.1-201ENST00000461723 211 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC073594.1-201ENST00000462065 364 ntBASIC6.37□□□□□ -1.39
APOEP02649 AL355032.1-201ENST00000472981 438 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC098847.1-201ENST00000473094 348 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 RN7SKP35-201ENST00000517210 151 ntBASIC6.37□□□□□ -1.39
APOEP02649 OR6M2P-201ENST00000529831 871 ntBASIC6.37□□□□□ -1.39
APOEP02649 TOMM20P1-201ENST00000534518 427 ntBASIC6.37□□□□□ -1.39
APOEP02649 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 AC141002.1-201ENST00000607025 279 ntBASIC6.37□□□□□ -1.39
APOEP02649 AP001437.1-201ENST00000608783 456 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 AC092266.1-201ENST00000610958 165 ntBASIC6.37□□□□□ -1.39
APOEP02649 U1.25-201ENST00000614085 162 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC004801.6-201ENST00000616571 978 ntBASIC6.37□□□□□ -1.39
APOEP02649 MIR6071-201ENST00000616741 78 ntBASIC6.37□□□□□ -1.39
APOEP02649 U1.34-201ENST00000618578 162 ntBASIC6.37□□□□□ -1.39
APOEP02649 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.37□□□□□ -1.39
APOEP02649 U1.31-201ENST00000620022 160 ntBASIC6.37□□□□□ -1.39
APOEP02649 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.37□□□□□ -1.39
APOEP02649 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 AC022325.1-201ENST00000502748 2199 ntBASIC6.37□□□□□ -1.39
APOEP02649 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
APOEP02649 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
APOEP02649 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
APOEP02649 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.36□□□□□ -1.39
APOEP02649 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 MTCO1P28-201ENST00000574177 1528 ntBASIC6.36□□□□□ -1.39
APOEP02649 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 IFIT1P1-201ENST00000400497 1449 ntBASIC6.36□□□□□ -1.39
APOEP02649 AC093225.1-201ENST00000506867 1408 ntBASIC6.36□□□□□ -1.39
APOEP02649 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 COX6B1P3-201ENST00000312310 260 ntBASIC6.36□□□□□ -1.39
APOEP02649 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.36□□□□□ -1.39
APOEP02649 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
APOEP02649 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.36□□□□□ -1.39
APOEP02649 SNORA51.9-201ENST00000384295 124 ntBASIC6.36□□□□□ -1.39
APOEP02649 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.36□□□□□ -1.39
APOEP02649 RPL12P12-201ENST00000424633 501 ntBASIC6.36□□□□□ -1.39
APOEP02649 AC023141.3-201ENST00000436698 278 ntBASIC6.36□□□□□ -1.39
APOEP02649 AL353662.1-201ENST00000439099 327 ntBASIC6.36□□□□□ -1.39
APOEP02649 AMYP1-201ENST00000440059 1023 ntBASIC6.36□□□□□ -1.39
APOEP02649 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.36□□□□□ -1.39
APOEP02649 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.36□□□□□ -1.39
APOEP02649 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.36□□□□□ -1.39
APOEP02649 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms