Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 RPL7L1P9-201ENST00000431298 745 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 GSTA7P-201ENST00000438425 448 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC245047.2-201ENST00000441060 530 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 EIF1P7-201ENST00000487533 337 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 RWDD4P1-201ENST00000488019 565 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC096996.1-201ENST00000563813 325 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC016911.1-201ENST00000613297 452 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 AL731566.2-201ENST00000618971 317 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AL136531.3-201ENST00000624378 3658 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 COL6A4P1-202ENST00000487147 4317 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AL645733.1-201ENST00000402250 217 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 SLC35E1P1-201ENST00000419313 864 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 VN1R54P-201ENST00000435210 1049 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 CYCSP12-201ENST00000437729 300 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC073594.1-201ENST00000462065 364 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 RN7SL583P-201ENST00000475692 287 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 SNORA58-201ENST00000505219 137 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 GSTP1P1-201ENST00000548078 319 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC100827.5-201ENST00000615883 426 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 OR11H2-202ENST00000641517 1085 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 AC087269.2-201ENST00000641764 975 ntBASIC8.97□□□□□ -0.97
RAPGEF3O95398 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RAPGEF3O95398 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
RAPGEF3O95398 CLCA3P-203ENST00000490028 2781 ntBASIC8.96□□□□□ -0.97
RAPGEF3O95398 AC131971.1-201ENST00000332881 1482 ntBASIC8.96□□□□□ -0.97
RAPGEF3O95398 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
RAPGEF3O95398 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
RAPGEF3O95398 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.97
RAPGEF3O95398 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.96□□□□□ -0.97
RAPGEF3O95398 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.96□□□□□ -0.97
RAPGEF3O95398 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.96□□□□□ -0.97
RAPGEF3O95398 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC005033.1-201ENST00000428904 813 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 MORF4L1P5-201ENST00000433352 961 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 RPS23P9-201ENST00000448848 438 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 FRG2FP-204ENST00000453982 852 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AL672167.3-201ENST00000465951 960 ntBASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RAPGEF3O95398 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.96□□□□□ -0.98
RAPGEF3O95398 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms