Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 RPL5P2-201ENST00000429598 854 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 AC096632.2-201ENST00000438139 1239 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 RN7SL254P-201ENST00000460609 284 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC124945.1-201ENST00000485133 188 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 CCDC11P1-201ENST00000503137 1162 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.66□□□□□ -1.5
UPK1AO00322 OR7E99P-201ENST00000505750 922 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 MAST4-IT1-201ENST00000514241 658 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.66□□□□□ -1.5
UPK1AO00322 OR1E3-201ENST00000575608 948 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.66□□□□□ -1.5
UPK1AO00322 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 AC096861.1-201ENST00000616652 240 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 MIR6721-201ENST00000617181 87 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC022400.9-201ENST00000623633 273 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC111152.1-202ENST00000635848 339 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
UPK1AO00322 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
UPK1AO00322 RNU1-134P-201ENST00000362935 165 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 RN7SKP128-201ENST00000364270 303 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 RNA5SP279-201ENST00000365513 117 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.65□□□□□ -1.5
UPK1AO00322 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 AL132875.1-201ENST00000403623 949 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.65□□□□□ -1.5
UPK1AO00322 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.65□□□□□ -1.5
UPK1AO00322 AL354766.1-201ENST00000423396 542 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AC023141.3-201ENST00000436698 278 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 CUBNP2-201ENST00000443534 1139 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.65□□□□□ -1.5
UPK1AO00322 AC016027.4-201ENST00000450866 277 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 SNRPCP3-201ENST00000474888 476 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 RPL9P15-201ENST00000491096 532 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AC092349.1-201ENST00000504903 310 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AC097486.1-201ENST00000515331 210 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.65□□□□□ -1.5
UPK1AO00322 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.65□□□□□ -1.5
UPK1AO00322 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPK1AO00322 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.65□□□□□ -1.5
UPK1AO00322 AL645933.2-201ENST00000606743 1207 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AC073389.3-201ENST00000609434 935 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 AL512652.1-201ENST00000619006 500 ntBASIC5.65□□□□□ -1.5
UPK1AO00322 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
UPK1AO00322 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.65□□□□□ -1.51
UPK1AO00322 AC083837.1-201ENST00000565297 2994 ntBASIC5.65□□□□□ -1.51
UPK1AO00322 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
UPK1AO00322 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
UPK1AO00322 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
UPK1AO00322 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UPK1AO00322 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
UPK1AO00322 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.65□□□□□ -1.51
UPK1AO00322 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
UPK1AO00322 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UPK1AO00322 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 AC009962.1-201ENST00000567327 3813 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 RN7SKP171-201ENST00000364417 303 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 RBBP4P5-201ENST00000398583 1266 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 ADAM24P-201ENST00000398655 2101 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 RPL12P12-201ENST00000424633 501 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 FTLP8-201ENST00000446770 267 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 HMGB1P7-201ENST00000450921 612 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 RSU1P1-201ENST00000453416 441 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 PPIAP7-201ENST00000454070 489 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 AC108751.3-201ENST00000461814 1020 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms