Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC099654.15-201ENST00000639802 509 ntBASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RCL1Q9Y2P8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 AC004158.1-201ENST00000564508 4319 ntBASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RCL1Q9Y2P8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC087752.1-201ENST00000391360 558 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 EEF1GP6-201ENST00000402309 905 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 RN7SKP121-201ENST00000410842 305 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 VTI1BP4-201ENST00000427516 527 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 RPS27AP6-201ENST00000427962 448 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 CHCHD4P5-201ENST00000436684 427 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 MED28P3-201ENST00000444288 531 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 FRG2FP-204ENST00000453982 852 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 PDCL3P4-201ENST00000489621 720 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 RPL10P7-201ENST00000495649 625 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC010409.2-201ENST00000505780 478 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 SCARNA11.1-201ENST00000516918 132 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 RPL3P13-201ENST00000550415 216 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC090826.1-203ENST00000569235 490 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC024085.1-201ENST00000604299 432 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL353807.4-201ENST00000604995 257 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC141002.1-201ENST00000607025 279 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL133481.2-203ENST00000607558 139 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC010998.3-201ENST00000613871 631 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC007204.1-201ENST00000621794 555 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AC007347.2-201ENST00000623044 180 ntBASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RCL1Q9Y2P8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 AC092111.2-201ENST00000611627 1414 ntBASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 AC020633.1-201ENST00000468439 2247 ntBASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 CR382285.2-201ENST00000624662 1495 ntBASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RCL1Q9Y2P8 AC024651.2-201ENST00000562480 2098 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms