Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 AC009237.12-201ENST00000604755 742 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 PSG10P-201ENST00000501199 1500 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 RNA5SP242-201ENST00000364171 118 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 SNORA70.9-201ENST00000384370 135 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 HMGN1P36-201ENST00000446623 298 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 RPS26P39-201ENST00000469206 341 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 RN7SKP248-201ENST00000516278 305 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC051619.2-201ENST00000559063 397 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC020763.5-201ENST00000623298 430 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 RNF19BPY-201ENST00000458209 1550 ntBASIC8.37□□□□□ -1.07
CCDC7Q96M83 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC7Q96M83 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CCDC7Q96M83 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 U3.25-201ENST00000391209 220 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 RPL23AP17-201ENST00000401064 499 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 AL354890.1-201ENST00000413730 346 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 BX510359.3-201ENST00000422168 306 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 RPS12P17-201ENST00000438591 377 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 AC023141.9-201ENST00000458734 412 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 RN7SL352P-201ENST00000466002 277 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 RN7SL717P-201ENST00000478343 297 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 RPL23AP40-201ENST00000487630 390 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 AC092121.1-201ENST00000569452 202 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 AP005119.1-201ENST00000580956 292 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 MIR6809-201ENST00000612189 116 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 AP004289.1-201ENST00000436307 2205 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 AC034229.2-201ENST00000566945 2508 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 CR788268.1-201ENST00000603931 1809 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 AC005224.3-201ENST00000584683 2140 ntBASIC8.36□□□□□ -1.07
CCDC7Q96M83 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC7Q96M83 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC7Q96M83 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC7Q96M83 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC7Q96M83 AL121977.1-201ENST00000401636 979 ntBASIC8.35□□□□□ -1.07
CCDC7Q96M83 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC7Q96M83 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC7Q96M83 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.35□□□□□ -1.07
CCDC7Q96M83 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms