Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 AC012213.2-201ENST00000562917 4597 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 RNU4-28P-201ENST00000364739 141 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
ERCC3P19447 RNU6-244P-201ENST00000391028 104 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 ATP5F1P2-201ENST00000398143 760 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 BTF3P8-201ENST00000414577 526 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.06□□□□□ -1.12
ERCC3P19447 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 LINC00328-2P-201ENST00000436585 219 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 LSM3P3-201ENST00000436601 306 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 MYL6P3-201ENST00000436904 432 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC8.06□□□□□ -1.12
ERCC3P19447 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 YWHAZP2-201ENST00000440317 728 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.06□□□□□ -1.12
ERCC3P19447 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 OR6K5P-201ENST00000447050 945 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 VN1R40P-201ENST00000455196 941 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 H3F3AP5-201ENST00000475267 429 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.06□□□□□ -1.12
ERCC3P19447 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC095052.1-201ENST00000509955 863 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC118465.1-201ENST00000513820 1271 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 RNA5SP303-201ENST00000516192 130 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 IGKV2D-38-201ENST00000518423 240 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AP001000.1-201ENST00000526843 742 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.06□□□□□ -1.12
ERCC3P19447 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 MTCYBP27-201ENST00000555160 670 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 PPIAP6-201ENST00000557078 499 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 AC025588.2-201ENST00000604851 466 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC104184.1-201ENST00000607513 721 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AP002782.1-201ENST00000623107 614 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AC078883.4-201ENST00000623218 367 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
ERCC3P19447 AL049541.2-201ENST00000626377 555 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 AL596275.2-208ENST00000641192 594 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 BX649567.1-201ENST00000642071 1134 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 AP002800.1-201ENST00000624982 2225 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.06□□□□□ -1.12
ERCC3P19447 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.06□□□□□ -1.12
ERCC3P19447 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 FANCD2P2-201ENST00000437591 1400 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 AC132219.2-201ENST00000624416 2327 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 RNU6-1263P-201ENST00000384601 106 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 SNORA7A-201ENST00000384765 139 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AC245036.1-201ENST00000391727 309 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 RPL7AP51-201ENST00000422016 760 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 RPS6P15-201ENST00000431996 751 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 AC092601.1-201ENST00000444526 383 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms