Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC123769.1-201ENST00000530992 3192 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
SLC28A1O00337 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SLC28A1O00337 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SLC28A1O00337 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 EIF3EP1-201ENST00000433978 1316 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 KYNUP3-201ENST00000574386 1341 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL139805.1-201ENST00000407837 289 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 RNA5SP156-201ENST00000410250 110 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL590399.2-201ENST00000427536 309 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 USP24P1-201ENST00000433802 779 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 REG1CP-206ENST00000447469 496 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 RBMY2HP-201ENST00000457961 720 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 ACA64.4-201ENST00000459070 127 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 RN7SL836P-201ENST00000476140 296 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 AC093719.1-201ENST00000480427 441 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 CR383656.1-201ENST00000484916 377 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC28A1O00337 OR2A3P-201ENST00000493774 953 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 LDHAP1-201ENST00000509421 992 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 TOMM22P4-201ENST00000511318 336 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 RNA5SP434-201ENST00000516647 121 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC28A1O00337 OR56A7P-201ENST00000524865 941 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC28A1O00337 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SLC28A1O00337 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC28A1O00337 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
SLC28A1O00337 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SLC28A1O00337 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC233968.1-201ENST00000611212 1300 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 RN7SKP128-201ENST00000364270 303 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC245096.1-201ENST00000413104 546 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC28A1O00337 OR5W1P-201ENST00000423705 938 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC234771.2-201ENST00000445718 597 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC090058.1-201ENST00000498788 435 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC28A1O00337 MTCO3P42-201ENST00000509488 518 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms