Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 RNU6-615P-201ENST00000516065 106 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC145423.1-201ENST00000605712 336 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 PARP4P2-201ENST00000446672 3326 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AL355377.1-201ENST00000621125 1653 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.84□□□□□ -1
SHANK2Q9UPX8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 SNORA11-201ENST00000408789 128 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 RN7SKP125-201ENST00000410481 302 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 RPL37P18-201ENST00000411602 243 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 HMGA1P8-201ENST00000414130 321 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 FABP5P2-201ENST00000439042 408 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 EEF1B2P6-201ENST00000445713 673 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC008953.1-201ENST00000497334 318 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 GARSP1-201ENST00000570895 719 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AL049840.6-201ENST00000604583 345 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 TMEM75-201ENST00000624314 2165 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AL357752.1-201ENST00000412817 349 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 OR5W1P-201ENST00000423705 938 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC009784.1-201ENST00000426484 460 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 CBX1P2-201ENST00000453841 458 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 RPL7L1P3-201ENST00000455249 689 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC004129.2-201ENST00000457229 287 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHANK2Q9UPX8 BX510359.5-201ENST00000515651 304 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 RNA5SP92-201ENST00000516437 110 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 MRPS16P1-201ENST00000523462 412 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 AC021766.1-201ENST00000624404 741 ntBASIC8.83□□□□□ -1
SHANK2Q9UPX8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SHANK2Q9UPX8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 AC006213.6-201ENST00000623722 4179 ntBASIC8.82□□□□□ -1
SHANK2Q9UPX8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 RN7SKP103-201ENST00000363848 320 ntBASIC8.82□□□□□ -1
SHANK2Q9UPX8 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 RPL23AP40-201ENST00000487630 390 ntBASIC8.82□□□□□ -1
SHANK2Q9UPX8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 NRBF2P4-201ENST00000520874 850 ntBASIC8.82□□□□□ -1
SHANK2Q9UPX8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 MIR4505-201ENST00000582238 73 ntBASIC8.82□□□□□ -1
SHANK2Q9UPX8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 OR7A1P-201ENST00000601206 970 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms