Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC023968.1-201ENST00000560719 475 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC026898.1-201ENST00000586404 571 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC012368.3-201ENST00000604190 219 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 SNORA35B-201ENST00000607417 129 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC018645.2-201ENST00000609151 472 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 MIR6085-201ENST00000618314 110 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AP001264.1-201ENST00000620602 703 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AL049777.1-201ENST00000622740 518 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 LINC01613-201ENST00000561476 2780 ntBASIC6.56□□□□□ -1.36
DKK3Q9UBP4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DKK3Q9UBP4 CDY11P-201ENST00000447168 1651 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL161912.4-201ENST00000623889 2468 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 RNA5SP512-201ENST00000364550 120 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 RNA5SP485-201ENST00000365053 119 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 MIR7-1-201ENST00000384871 110 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL391419.1-201ENST00000398901 1275 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL357078.2-201ENST00000416486 427 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 TVP23BP2-201ENST00000455082 615 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 MTCYBP14-201ENST00000457471 715 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 RPL29P23-201ENST00000486188 442 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 PFN1P8-201ENST00000497012 543 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC010460.2-201ENST00000509054 677 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 GUSBP9-201ENST00000510138 584 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC134349.2-201ENST00000535136 910 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 NDUFA5P11-201ENST00000567995 343 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC063977.7-201ENST00000594454 337 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC245884.10-201ENST00000597355 337 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL589765.6-201ENST00000601909 549 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 WBP1LP12-201ENST00000604449 331 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC016597.2-201ENST00000613256 341 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC104763.3-201ENST00000613765 618 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC010998.3-201ENST00000613871 631 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC012676.3-201ENST00000614983 479 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AC125336.1-201ENST00000508893 2827 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 MAPK10-344ENST00000641718 3746 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 FO082842.1-201ENST00000423552 1370 ntBASIC6.55□□□□□ -1.36
DKK3Q9UBP4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
DKK3Q9UBP4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 RNA5SP188-201ENST00000362916 129 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms