Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 YWHAZP4-201ENST00000392459 708 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 ARMC4P1-201ENST00000438905 707 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC095052.1-201ENST00000509955 863 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC078899.1-201ENST00000521432 1185 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 OR7E158P-201ENST00000524483 910 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC131935.1-201ENST00000524621 333 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC007346.2-201ENST00000564816 892 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC063977.7-201ENST00000594454 337 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC096861.1-201ENST00000616652 240 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC091059.2-201ENST00000623355 614 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 AL442128.2-201ENST00000620246 1824 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 RN7SKP144-201ENST00000411108 279 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 ZNF619P1-201ENST00000446539 752 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 RPS18P1-201ENST00000447840 458 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC016027.4-201ENST00000450866 277 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 FRG2FP-204ENST00000453982 852 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC122714.1-201ENST00000502510 459 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC090424.1-201ENST00000535243 736 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC126615.2-201ENST00000553003 515 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC023389.2-201ENST00000580031 955 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.65□□□□□ -1.5
VAPAQ9P0L0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.65□□□□□ -1.5
VAPAQ9P0L0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 AC011933.2-201ENST00000578539 2790 ntBASIC5.65□□□□□ -1.51
VAPAQ9P0L0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 CAP1P2-201ENST00000417455 1409 ntBASIC5.65□□□□□ -1.51
VAPAQ9P0L0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VAPAQ9P0L0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC027279.4-201ENST00000624371 2072 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms