Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CYCSP52-201ENST00000422857 310 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 E2F6P1-201ENST00000428850 745 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 E2F6P3-201ENST00000441743 743 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 CTSLP6-201ENST00000458273 1002 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 RPSAP24-201ENST00000461543 873 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 RN7SL70P-201ENST00000478322 302 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 RN7SL267P-201ENST00000485107 261 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 RPL19P11-201ENST00000495944 589 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 HMGB1P3-201ENST00000502802 616 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC110760.3-202ENST00000515177 371 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 NOP56P3-201ENST00000549457 385 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 CHEK2P2-201ENST00000554701 672 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC023158.1-201ENST00000561632 1025 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 QTRT1P1-201ENST00000604344 1078 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC005899.7-201ENST00000618199 588 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL133370.2-201ENST00000619934 439 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL445528.2-201ENST00000620582 470 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AP003476.1-201ENST00000623984 516 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 KYNUP2-201ENST00000582280 1329 ntBASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM54Q9BYV2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL161901.1-201ENST00000624954 3425 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 RNU6-1251P-201ENST00000364502 107 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 RNA5SP140-201ENST00000364524 92 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL451142.1-201ENST00000375867 775 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 SNORD65-201ENST00000391079 73 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC026310.1-201ENST00000396004 378 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 FDPSP5-201ENST00000399474 1057 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 RNA5SP251-201ENST00000410614 137 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 RN7SKP205-201ENST00000410999 307 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL157884.3-201ENST00000448273 1184 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 CCRL1P1-201ENST00000449542 1053 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AKR1D1P1-201ENST00000457236 936 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC018639.1-201ENST00000492994 442 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC245052.7-201ENST00000601161 359 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL591222.2-201ENST00000604443 754 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC027449.1-201ENST00000608890 407 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC015922.4-201ENST00000612568 690 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AC018659.2-201ENST00000624690 715 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL356118.1-201ENST00000635272 1078 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 OR5AC4P-202ENST00000642086 985 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms