Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 KYNUP2-201ENST00000582280 1329 ntBASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 CCDC150P1-201ENST00000537123 2215 ntBASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 AC089998.1-201ENST00000548575 3141 ntBASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATG4AQ8WYN0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL133243.2-201ENST00000610331 1621 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC007159.1-201ENST00000566529 4706 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 GCNT6-201ENST00000379591 934 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC003045.1-201ENST00000398779 713 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 CCNB2P1-201ENST00000399411 1150 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL033519.1-201ENST00000407266 307 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC073464.3-201ENST00000422564 712 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC016027.5-201ENST00000427227 210 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 COX4I1P2-201ENST00000447446 547 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 EIF3LP2-201ENST00000457262 807 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ATP5G1P3-201ENST00000463301 410 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 RN7SL790P-201ENST00000474043 298 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 RN7SL369P-201ENST00000477138 299 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC010343.2-201ENST00000510162 224 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC090286.3-201ENST00000573133 187 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 GLYATL1P2-202ENST00000588046 902 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 FAM60CP-201ENST00000591086 664 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC020916.2-201ENST00000591242 360 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC005776.1-201ENST00000603164 290 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC018754.1-201ENST00000607486 925 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AL356608.1-201ENST00000610034 820 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC009269.6-201ENST00000621778 588 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 AC006927.4-201ENST00000639187 543 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 SMG1P5-202ENST00000529428 4219 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 SMG1P2-201ENST00000566127 4221 ntBASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4AQ8WYN0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 SNORA43.1-201ENST00000364863 140 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 RNA5SP85-201ENST00000365378 119 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 AL121835.1-201ENST00000404250 354 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 DHFRP2-201ENST00000414224 547 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 RPS26P38-201ENST00000414476 348 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 RPL23AP18-201ENST00000416139 468 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 AC019205.1-201ENST00000421830 730 ntBASIC6.43□□□□□ -1.38
ATG4AQ8WYN0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms