Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RBBP4P1-201ENST00000502424 1276 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 LDHAP1-201ENST00000509421 992 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 Vault.2-201ENST00000516519 98 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AC078899.1-201ENST00000521432 1185 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AL845552.1-201ENST00000556820 323 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 AC091167.5-201ENST00000605689 894 ntBASIC6.39□□□□□ -1.39
LMO3Q8TAP4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMO3Q8TAP4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 SNRPEP6-201ENST00000407465 277 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 RFESDP1-201ENST00000422350 461 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 RPL12P16-201ENST00000431098 498 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC007679.3-201ENST00000434035 414 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AL663074.2-201ENST00000440621 479 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC005077.1-201ENST00000449226 375 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 OSTCP1-201ENST00000455507 450 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 PFN1P6-201ENST00000476786 399 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC092865.4-201ENST00000477936 615 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 MIR2117-201ENST00000516780 80 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 RNA5SP340-201ENST00000517132 107 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC007346.2-201ENST00000564816 892 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC005244.1-201ENST00000582566 339 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC009779.8-202ENST00000607990 932 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC108673.3-201ENST00000609183 335 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AL109620.1-201ENST00000618738 1197 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 QRSL1P1-201ENST00000400977 1540 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AL137918.1-201ENST00000624542 1922 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 AC092070.2-203ENST00000598377 3644 ntBASIC6.38□□□□□ -1.39
LMO3Q8TAP4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
LMO3Q8TAP4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 KRT8P51-201ENST00000438938 274 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 CST12P-201ENST00000457644 362 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AL157777.1-201ENST00000468100 304 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 EIF4E2P2-201ENST00000492033 736 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 RPL12P7-201ENST00000493832 494 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.37□□□□□ -1.39
LMO3Q8TAP4 PRMT5P1-201ENST00000514351 598 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 AC090424.1-201ENST00000535243 736 ntBASIC6.37□□□□□ -1.39
LMO3Q8TAP4 TRAV11-201ENST00000539512 339 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms