Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC024651.2-201ENST00000562480 2098 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AL365220.1-201ENST00000432923 399 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC010086.1-201ENST00000437359 1052 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC245291.3-201ENST00000443400 292 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 CYCSP51-201ENST00000443545 318 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 POU5F1P5-201ENST00000445059 658 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 RPL34P33-201ENST00000486062 334 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC114324.2-202ENST00000503812 134 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 RPSAP75-201ENST00000605848 301 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC141002.1-201ENST00000607025 279 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 MIR6811-201ENST00000620409 58 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 AC073869.7-201ENST00000640874 297 ntBASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.83□□□□□ -1.48
CLHC1Q8NHS4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC015689.2-201ENST00000528172 1738 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC114876.1-201ENST00000490962 1366 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AL445213.1-201ENST00000412589 747 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 MGAT2P2-201ENST00000427194 797 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AL512593.1-201ENST00000444758 779 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 RN7SL104P-201ENST00000498686 293 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 CYP4F27P-201ENST00000514557 494 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 SNORA74.4-201ENST00000607595 199 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 uc_338.26-201ENST00000612659 160 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC097063.1-201ENST00000426714 1797 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 AC011416.1-201ENST00000514947 1732 ntBASIC5.82□□□□□ -1.48
CLHC1Q8NHS4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms