Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPL39P62891 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 ZNF619P1-201ENST00000446539 752 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 RARRES2P3-201ENST00000457739 473 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC104164.1-201ENST00000460282 590 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 RPL34P33-201ENST00000486062 334 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC009567.2-201ENST00000502989 349 ntBASIC4.14□□□□□ -1.75
RPL39P62891 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.14□□□□□ -1.75
RPL39P62891 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 MIR2117-201ENST00000516780 80 ntBASIC4.14□□□□□ -1.75
RPL39P62891 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.14□□□□□ -1.75
RPL39P62891 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 OR7E158P-201ENST00000524483 910 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC021269.1-201ENST00000526860 705 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.14□□□□□ -1.75
RPL39P62891 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.14□□□□□ -1.75
RPL39P62891 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 AC007786.3-201ENST00000615154 596 ntBASIC4.14□□□□□ -1.75
RPL39P62891 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.14□□□□□ -1.75
RPL39P62891 MIR6807-201ENST00000621968 92 ntBASIC4.14□□□□□ -1.75
RPL39P62891 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.14□□□□□ -1.75
RPL39P62891 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 VN2R1P-201ENST00000449668 1743 ntBASIC4.14□□□□□ -1.75
RPL39P62891 MARK2P4-201ENST00000503381 2380 ntBASIC4.14□□□□□ -1.75
RPL39P62891 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.14□□□□□ -1.75
RPL39P62891 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPL39P62891 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 CASC19-246ENST00000641625 1606 ntBASIC4.13□□□□□ -1.75
RPL39P62891 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AC004158.1-201ENST00000564508 4319 ntBASIC4.13□□□□□ -1.75
RPL39P62891 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AC018717.1-201ENST00000457712 1505 ntBASIC4.13□□□□□ -1.75
RPL39P62891 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 RN7SKP145-201ENST00000363291 303 ntBASIC4.13□□□□□ -1.75
RPL39P62891 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPL39P62891 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 RN7SKP144-201ENST00000411108 279 ntBASIC4.13□□□□□ -1.75
RPL39P62891 RN7SKP279-201ENST00000411383 298 ntBASIC4.13□□□□□ -1.75
RPL39P62891 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 AL161742.1-201ENST00000418154 584 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC006509.1-201ENST00000420788 634 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 AC096775.1-201ENST00000437724 448 ntBASIC4.13□□□□□ -1.75
RPL39P62891 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 RPS23P9-201ENST00000448848 438 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC016027.4-201ENST00000450866 277 ntBASIC4.13□□□□□ -1.75
RPL39P62891 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 AC006539.1-201ENST00000481419 501 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC105420.1-201ENST00000504389 582 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.13□□□□□ -1.75
RPL39P62891 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 AP001994.1-201ENST00000527539 826 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.13□□□□□ -1.75
RPL39P62891 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.13□□□□□ -1.75
RPL39P62891 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 AC100832.2-201ENST00000582080 776 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AC026898.1-201ENST00000586404 571 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AL031429.2-201ENST00000602605 649 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms