Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.98□□□□□ -1.45
SHMT2P34897 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.98□□□□□ -1.45
SHMT2P34897 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.98□□□□□ -1.45
SHMT2P34897 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 AC009237.12-201ENST00000604755 742 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.98□□□□□ -1.45
SHMT2P34897 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 RFPL4AP6-201ENST00000616792 846 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 AC003992.1-201ENST00000635364 557 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 AC116667.2-201ENST00000641075 823 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 OR7A1P-202ENST00000641542 1158 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SHMT2P34897 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 AC087516.1-201ENST00000561236 2428 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 SHQ1P1-201ENST00000437111 1544 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.98□□□□□ -1.45
SHMT2P34897 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.98□□□□□ -1.45
SHMT2P34897 CCNT2P1-201ENST00000423082 1315 ntBASIC5.98□□□□□ -1.45
SHMT2P34897 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHMT2P34897 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHMT2P34897 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHMT2P34897 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.97□□□□□ -1.45
SHMT2P34897 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SHMT2P34897 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SHMT2P34897 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHMT2P34897 MIR621-201ENST00000384919 96 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHMT2P34897 CXADRP1-201ENST00000398098 1095 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 RPL7P58-201ENST00000402913 758 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC007679.3-201ENST00000434035 414 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 LDHAP2-201ENST00000437325 985 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.97□□□□□ -1.45
SHMT2P34897 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.97□□□□□ -1.45
SHMT2P34897 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.97□□□□□ -1.45
SHMT2P34897 RNA5SP434-201ENST00000516647 121 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.97□□□□□ -1.45
SHMT2P34897 AC021269.1-201ENST00000526860 705 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC092332.1-201ENST00000563684 829 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC093524.1-201ENST00000564266 1094 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.97□□□□□ -1.45
SHMT2P34897 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 CXADRP3-202ENST00000617265 1100 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AL512652.1-201ENST00000619006 500 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.97□□□□□ -1.45
SHMT2P34897 AL137067.2-201ENST00000621202 131 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 AC018717.1-201ENST00000457712 1505 ntBASIC5.97□□□□□ -1.45
SHMT2P34897 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHMT2P34897 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.97□□□□□ -1.45
SHMT2P34897 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHMT2P34897 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHMT2P34897 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.97□□□□□ -1.45
SHMT2P34897 AOX3P-204ENST00000491025 2107 ntBASIC5.96□□□□□ -1.45
SHMT2P34897 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHMT2P34897 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SHMT2P34897 HDAC1P2-201ENST00000453661 1398 ntBASIC5.96□□□□□ -1.45
SHMT2P34897 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.96□□□□□ -1.45
SHMT2P34897 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHMT2P34897 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 AC096921.2-201ENST00000561507 1916 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
SHMT2P34897 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 RPL23AP17-201ENST00000401064 499 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AL132875.1-201ENST00000403623 949 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.96□□□□□ -1.46
SHMT2P34897 RPL35AP31-201ENST00000418340 337 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.96□□□□□ -1.46
SHMT2P34897 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 SEPT14P12-201ENST00000442280 560 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AC079922.1-201ENST00000443291 359 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 RBMY2AP-201ENST00000445405 1157 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 RBMY2CP-201ENST00000448575 1157 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 RBMY2DP-202ENST00000448881 1157 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 RBMY2BP-202ENST00000451071 1156 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 RPS27AP3-201ENST00000453803 454 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.96□□□□□ -1.46
SHMT2P34897 AL355032.1-201ENST00000472981 438 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.96□□□□□ -1.46
SHMT2P34897 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 CR383658.1-201ENST00000514609 734 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms