Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AL121578.2-201ENST00000448797 447 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 TRBV5-2-201ENST00000489095 273 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC111000.6-201ENST00000514471 709 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC113191.1-201ENST00000517759 403 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 SNRPCP6-201ENST00000528310 210 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.8□□□□□ -1.48
CLPTM1O96005 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.8□□□□□ -1.48
CLPTM1O96005 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 CHEK2P2-201ENST00000554701 672 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AL049779.3-201ENST00000557141 606 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC009120.3-201ENST00000563335 499 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC091304.4-201ENST00000565703 620 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC090286.3-201ENST00000573133 187 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC027216.1-201ENST00000577726 685 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC060780.2-201ENST00000589047 198 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC010503.3-201ENST00000594355 540 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC061999.1-201ENST00000624454 177 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.8□□□□□ -1.48
CLPTM1O96005 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 SSXP3-201ENST00000442971 1300 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLPTM1O96005 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLPTM1O96005 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLPTM1O96005 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 UBBP1-201ENST00000392399 473 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 MIR1266-201ENST00000408125 84 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.79□□□□□ -1.48
CLPTM1O96005 RPS10P21-201ENST00000430654 475 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 UBE2V2P3-201ENST00000433562 437 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AL022324.2-201ENST00000434827 780 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 RPL5P25-201ENST00000441148 775 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 PA2G4P1-201ENST00000442248 1197 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 RPL31P11-202ENST00000454082 372 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AC112187.1-201ENST00000455837 479 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.79□□□□□ -1.48
CLPTM1O96005 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 RPS3AP49-201ENST00000472161 790 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 RPL5P33-201ENST00000487833 905 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.79□□□□□ -1.48
CLPTM1O96005 snoU109.5-201ENST00000516231 132 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC007068.2-201ENST00000543168 395 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 OR4C49P-201ENST00000563891 900 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLPTM1O96005 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC024267.2-201ENST00000582737 417 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
CLPTM1O96005 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC010132.4-201ENST00000569883 1368 ntBASIC5.79□□□□□ -1.48
CLPTM1O96005 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLPTM1O96005 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.79□□□□□ -1.48
CLPTM1O96005 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms