Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC006116.1-201ENST00000587908 2171 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC091544.5-201ENST00000620192 3815 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 KARSP2-201ENST00000415696 1639 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 SPATA31C2-201ENST00000324915 3777 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AC010329.1-201ENST00000593903 8328 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 MAPK10-287ENST00000641217 3037 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 MIR152-201ENST00000385212 87 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CNOT4O95628 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AL121978.1-201ENST00000402778 359 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AL356131.1-201ENST00000405826 414 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC099535.1-201ENST00000408928 371 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AL390023.1-201ENST00000428836 262 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 RPL29P7-201ENST00000440227 457 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.36□□□□□ -1.39
CNOT4O95628 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 PPIAP32-201ENST00000449940 472 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 RPSAP7-201ENST00000456871 885 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 PABPC1P10-201ENST00000464731 381 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 RN7SL797P-201ENST00000486314 297 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AP005202.1-201ENST00000489915 867 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC092349.1-201ENST00000504903 310 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 MRPL57P6-201ENST00000506570 309 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 MTCYBP16-201ENST00000509187 1129 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.36□□□□□ -1.39
CNOT4O95628 RNA5SP518-201ENST00000515957 119 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC134698.4-201ENST00000523451 826 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.36□□□□□ -1.39
CNOT4O95628 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.36□□□□□ -1.39
CNOT4O95628 AL109628.1-201ENST00000556877 366 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 OR4C49P-201ENST00000563891 900 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC091932.1-201ENST00000569381 427 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC009955.2-201ENST00000597288 542 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 BMS1P7-201ENST00000602440 1052 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC068790.6-201ENST00000602558 258 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC080078.2-201ENST00000603766 501 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.36□□□□□ -1.39
CNOT4O95628 AC093635.1-201ENST00000609028 555 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms