Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC022325.1-201ENST00000502748 2199 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC011416.1-201ENST00000514947 1732 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RNU11-6P-201ENST00000391127 133 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RPL7P58-201ENST00000402913 758 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AL132875.1-201ENST00000403623 949 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RNA5SP156-201ENST00000410250 110 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC130360.1-201ENST00000425489 1117 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RPL6P30-201ENST00000443382 862 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC068228.1-201ENST00000461723 211 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC073594.1-201ENST00000462065 364 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC098847.1-201ENST00000473094 348 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RN7SKP238-201ENST00000516483 249 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RNA5SP400-201ENST00000517155 111 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC130365.2-201ENST00000525882 1201 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 CYCSP38-201ENST00000559840 322 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC092332.1-201ENST00000563684 829 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC068768.2-201ENST00000602352 343 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC079315.1-201ENST00000602952 623 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 MIR6778-201ENST00000617912 73 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 MIR1910-201ENST00000636955 80 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 AC024651.2-201ENST00000562480 2098 ntBASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.37□□□□□ -1.39
RFWD3Q6PCD5 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC004386.1-201ENST00000393214 761 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 RN7SKP161-201ENST00000411110 305 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 RNA5SP434-201ENST00000516647 121 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 OR4A40P-201ENST00000533878 948 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 RNU4ATAC-201ENST00000580972 127 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC009237.12-201ENST00000604755 742 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC008555.7-201ENST00000605008 583 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC024589.2-201ENST00000605642 1294 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms