Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX3P41225 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX3P41225 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX3P41225 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX3P41225 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX3P41225 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX3P41225 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
SOX3P41225 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX3P41225 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX3P41225 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX3P41225 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.77□□□□□ -1.48
SOX3P41225 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 AC092070.2-203ENST00000598377 3644 ntBASIC5.77□□□□□ -1.49
SOX3P41225 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 GUCY1B2-204ENST00000531898 1979 ntBASIC5.77□□□□□ -1.49
SOX3P41225 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 IFIT1P1-201ENST00000400497 1449 ntBASIC5.77□□□□□ -1.49
SOX3P41225 MARK2P4-201ENST00000503381 2380 ntBASIC5.77□□□□□ -1.49
SOX3P41225 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 AC009831.5-201ENST00000624000 3189 ntBASIC5.77□□□□□ -1.49
SOX3P41225 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 AL161901.1-201ENST00000624954 3425 ntBASIC5.77□□□□□ -1.49
SOX3P41225 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SOX3P41225 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SOX3P41225 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.77□□□□□ -1.49
SOX3P41225 UBE2V1P14-201ENST00000415815 558 ntBASIC5.77□□□□□ -1.49
SOX3P41225 IGLV3-4-201ENST00000432300 244 ntBASIC5.77□□□□□ -1.49
SOX3P41225 AC007679.3-201ENST00000434035 414 ntBASIC5.77□□□□□ -1.49
SOX3P41225 VN1R96P-201ENST00000446052 858 ntBASIC5.77□□□□□ -1.49
SOX3P41225 OR52I1-201ENST00000450052 1050 ntBASIC5.77□□□□□ -1.49
SOX3P41225 HIGD1AP16-201ENST00000450986 258 ntBASIC5.77□□□□□ -1.49
SOX3P41225 AL022319.1-201ENST00000458183 1167 ntBASIC5.77□□□□□ -1.49
SOX3P41225 RN7SL221P-201ENST00000466190 281 ntBASIC5.77□□□□□ -1.49
SOX3P41225 AP002884.1-201ENST00000479691 655 ntBASIC5.77□□□□□ -1.49
SOX3P41225 RPL34P33-201ENST00000486062 334 ntBASIC5.77□□□□□ -1.49
SOX3P41225 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX3P41225 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX3P41225 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.77□□□□□ -1.49
SOX3P41225 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX3P41225 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX3P41225 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 AC134669.1-201ENST00000581275 672 ntBASIC5.77□□□□□ -1.49
SOX3P41225 MIR4420-201ENST00000583944 77 ntBASIC5.77□□□□□ -1.49
SOX3P41225 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.77□□□□□ -1.49
SOX3P41225 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 AC010998.3-201ENST00000613871 631 ntBASIC5.77□□□□□ -1.49
SOX3P41225 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.77□□□□□ -1.49
SOX3P41225 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 AC018717.1-201ENST00000457712 1505 ntBASIC5.77□□□□□ -1.49
SOX3P41225 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SOX3P41225 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SOX3P41225 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SOX3P41225 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX3P41225 AOX3P-204ENST00000491025 2107 ntBASIC5.77□□□□□ -1.49
SOX3P41225 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SOX3P41225 EIF3EP1-201ENST00000433978 1316 ntBASIC5.76□□□□□ -1.49
SOX3P41225 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX3P41225 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX3P41225 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX3P41225 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX3P41225 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX3P41225 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SOX3P41225 MAPK10-287ENST00000641217 3037 ntBASIC5.76□□□□□ -1.49
SOX3P41225 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX3P41225 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SOX3P41225 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SOX3P41225 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.76□□□□□ -1.49
SOX3P41225 CYP4F30P-202ENST00000420048 405 ntBASIC5.76□□□□□ -1.49
SOX3P41225 GAPDHP34-201ENST00000432112 823 ntBASIC5.76□□□□□ -1.49
SOX3P41225 MORF4-201ENST00000447135 971 ntBASIC5.76□□□□□ -1.49
SOX3P41225 AC092967.1-201ENST00000449016 481 ntBASIC5.76□□□□□ -1.49
SOX3P41225 RANP2-201ENST00000456833 229 ntBASIC5.76□□□□□ -1.49
SOX3P41225 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX3P41225 AL355032.1-201ENST00000472981 438 ntBASIC5.76□□□□□ -1.49
SOX3P41225 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX3P41225 AC022784.5-201ENST00000522241 437 ntBASIC5.76□□□□□ -1.49
SOX3P41225 TOMM20P1-201ENST00000534518 427 ntBASIC5.76□□□□□ -1.49
SOX3P41225 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX3P41225 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX3P41225 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX3P41225 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX3P41225 MTATP6P25-201ENST00000574491 261 ntBASIC5.76□□□□□ -1.49
SOX3P41225 MIR4701-201ENST00000583094 63 ntBASIC5.76□□□□□ -1.49
SOX3P41225 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms