Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 CCDC11P1-201ENST00000503137 1162 ntBASIC6.22□□□□□ -1.41
HMGA1P17096 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGA1P17096 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGA1P17096 RN7SL787P-201ENST00000613000 284 ntBASIC6.22□□□□□ -1.41
HMGA1P17096 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.22□□□□□ -1.41
HMGA1P17096 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGA1P17096 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HMGA1P17096 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HMGA1P17096 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGA1P17096 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.21□□□□□ -1.41
HMGA1P17096 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
HMGA1P17096 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
HMGA1P17096 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGA1P17096 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGA1P17096 SHQ1P1-201ENST00000437111 1544 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
HMGA1P17096 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 RNA5SP242-201ENST00000364171 118 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HMGA1P17096 AL353626.3-201ENST00000413399 657 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 AC007568.1-201ENST00000422912 471 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AC099677.3-201ENST00000427081 395 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 RPS12P17-201ENST00000438591 377 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AC079922.1-201ENST00000443291 359 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 AC124945.1-201ENST00000485133 188 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 CYP4F27P-201ENST00000514557 494 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 SNORA70.20-201ENST00000516848 126 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 IGLV3-30-201ENST00000524362 298 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 HMGN2P36-201ENST00000529541 409 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 AC091078.2-201ENST00000557145 559 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AL683813.2-201ENST00000605245 502 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AL034408.1-201ENST00000637712 664 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGA1P17096 MIR193BHG-214ENST00000641765 509 ntBASIC6.21□□□□□ -1.42
HMGA1P17096 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGA1P17096 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HMGA1P17096 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGA1P17096 AC009831.5-201ENST00000624000 3189 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGA1P17096 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 RNA5SP211-201ENST00000365516 117 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 TMA16P2-201ENST00000413187 601 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 MRPL53P1-201ENST00000414323 319 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC079355.1-201ENST00000421770 223 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC127526.2-201ENST00000426436 775 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AC126120.1-201ENST00000431082 470 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC093166.4-201ENST00000457867 318 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 RN7SL717P-201ENST00000478343 297 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC023818.1-201ENST00000498379 384 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms